Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SIMC1Q8NDZ2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIMC1Q8NDZ2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.88■□□□□ 0.77
SIMC1Q8NDZ2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SIMC1Q8NDZ2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SIMC1Q8NDZ2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIMC1Q8NDZ2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SIMC1Q8NDZ2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SIMC1Q8NDZ2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.88■□□□□ 0.77
SIMC1Q8NDZ2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIMC1Q8NDZ2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIMC1Q8NDZ2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SIMC1Q8NDZ2 AC009237.3-201ENST00000393279 1427 ntBASIC19.88■□□□□ 0.77
SIMC1Q8NDZ2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIMC1Q8NDZ2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SIMC1Q8NDZ2 AC027612.3-201ENST00000413684 1047 ntBASIC19.88■□□□□ 0.77
SIMC1Q8NDZ2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SIMC1Q8NDZ2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.88■□□□□ 0.77
SIMC1Q8NDZ2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.88■□□□□ 0.77
SIMC1Q8NDZ2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SIMC1Q8NDZ2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SIMC1Q8NDZ2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SIMC1Q8NDZ2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIMC1Q8NDZ2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIMC1Q8NDZ2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIMC1Q8NDZ2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIMC1Q8NDZ2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIMC1Q8NDZ2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SIMC1Q8NDZ2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SIMC1Q8NDZ2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SIMC1Q8NDZ2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SIMC1Q8NDZ2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIMC1Q8NDZ2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIMC1Q8NDZ2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SIMC1Q8NDZ2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
SIMC1Q8NDZ2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIMC1Q8NDZ2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.86■□□□□ 0.77
SIMC1Q8NDZ2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.86■□□□□ 0.77
SIMC1Q8NDZ2 AC026310.3-201ENST00000625186 2373 ntBASIC19.86■□□□□ 0.77
SIMC1Q8NDZ2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIMC1Q8NDZ2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SIMC1Q8NDZ2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIMC1Q8NDZ2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIMC1Q8NDZ2 AC104564.3-201ENST00000582367 638 ntBASIC19.86■□□□□ 0.77
SIMC1Q8NDZ2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIMC1Q8NDZ2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIMC1Q8NDZ2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SIMC1Q8NDZ2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SIMC1Q8NDZ2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.85■□□□□ 0.77
SIMC1Q8NDZ2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SIMC1Q8NDZ2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SIMC1Q8NDZ2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SIMC1Q8NDZ2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIMC1Q8NDZ2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.85■□□□□ 0.77
SIMC1Q8NDZ2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIMC1Q8NDZ2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIMC1Q8NDZ2 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIMC1Q8NDZ2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIMC1Q8NDZ2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
SIMC1Q8NDZ2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.85■□□□□ 0.77
SIMC1Q8NDZ2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.85■□□□□ 0.77
SIMC1Q8NDZ2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.85■□□□□ 0.77
SIMC1Q8NDZ2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.85■□□□□ 0.77
SIMC1Q8NDZ2 AC244015.2-201ENST00000616358 1861 ntBASIC19.85■□□□□ 0.77
SIMC1Q8NDZ2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.85■□□□□ 0.77
SIMC1Q8NDZ2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.85■□□□□ 0.77
SIMC1Q8NDZ2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SIMC1Q8NDZ2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SIMC1Q8NDZ2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIMC1Q8NDZ2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SIMC1Q8NDZ2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIMC1Q8NDZ2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIMC1Q8NDZ2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.84■□□□□ 0.77
SIMC1Q8NDZ2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SIMC1Q8NDZ2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIMC1Q8NDZ2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIMC1Q8NDZ2 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.84■□□□□ 0.77
SIMC1Q8NDZ2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SIMC1Q8NDZ2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.84■□□□□ 0.77
SIMC1Q8NDZ2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.84■□□□□ 0.77
SIMC1Q8NDZ2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIMC1Q8NDZ2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SIMC1Q8NDZ2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SIMC1Q8NDZ2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.83■□□□□ 0.77
SIMC1Q8NDZ2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SIMC1Q8NDZ2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.83■□□□□ 0.77
SIMC1Q8NDZ2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SIMC1Q8NDZ2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.83■□□□□ 0.77
SIMC1Q8NDZ2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SIMC1Q8NDZ2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SIMC1Q8NDZ2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SIMC1Q8NDZ2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.83■□□□□ 0.77
SIMC1Q8NDZ2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.83■□□□□ 0.77
SIMC1Q8NDZ2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.83■□□□□ 0.77
SIMC1Q8NDZ2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SIMC1Q8NDZ2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.83■□□□□ 0.76
SIMC1Q8NDZ2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.83■□□□□ 0.76
SIMC1Q8NDZ2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.83■□□□□ 0.76
SIMC1Q8NDZ2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
SIMC1Q8NDZ2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms