Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LSMEM1Q8N8F7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LSMEM1Q8N8F7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LSMEM1Q8N8F7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LSMEM1Q8N8F7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
LSMEM1Q8N8F7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.36■□□□□ 0.69
LSMEM1Q8N8F7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
LSMEM1Q8N8F7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.36■□□□□ 0.69
LSMEM1Q8N8F7 AL139246.5-201ENST00000606645 996 ntBASIC19.36■□□□□ 0.69
LSMEM1Q8N8F7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LSMEM1Q8N8F7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LSMEM1Q8N8F7 AC005229.4-201ENST00000610085 2198 ntBASIC19.36■□□□□ 0.69
LSMEM1Q8N8F7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LSMEM1Q8N8F7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LSMEM1Q8N8F7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSMEM1Q8N8F7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.35■□□□□ 0.69
LSMEM1Q8N8F7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LSMEM1Q8N8F7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.35■□□□□ 0.69
LSMEM1Q8N8F7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSMEM1Q8N8F7 SUDS3P1-201ENST00000505831 966 ntBASIC19.35■□□□□ 0.69
LSMEM1Q8N8F7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.35■□□□□ 0.69
LSMEM1Q8N8F7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSMEM1Q8N8F7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.35■□□□□ 0.69
LSMEM1Q8N8F7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.35■□□□□ 0.69
LSMEM1Q8N8F7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSMEM1Q8N8F7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSMEM1Q8N8F7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LSMEM1Q8N8F7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSMEM1Q8N8F7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
LSMEM1Q8N8F7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LSMEM1Q8N8F7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LSMEM1Q8N8F7 AC055733.4-201ENST00000638462 1354 ntBASIC19.34■□□□□ 0.69
LSMEM1Q8N8F7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
LSMEM1Q8N8F7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.34■□□□□ 0.69
LSMEM1Q8N8F7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.34■□□□□ 0.69
LSMEM1Q8N8F7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LSMEM1Q8N8F7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LSMEM1Q8N8F7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.34■□□□□ 0.69
LSMEM1Q8N8F7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LSMEM1Q8N8F7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.34■□□□□ 0.69
LSMEM1Q8N8F7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LSMEM1Q8N8F7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LSMEM1Q8N8F7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LSMEM1Q8N8F7 BX005040.4-201ENST00000637145 1518 ntBASIC19.34■□□□□ 0.69
LSMEM1Q8N8F7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LSMEM1Q8N8F7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.34■□□□□ 0.69
LSMEM1Q8N8F7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.34■□□□□ 0.69
LSMEM1Q8N8F7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LSMEM1Q8N8F7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
LSMEM1Q8N8F7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LSMEM1Q8N8F7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LSMEM1Q8N8F7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.33■□□□□ 0.69
LSMEM1Q8N8F7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.33■□□□□ 0.68
LSMEM1Q8N8F7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
LSMEM1Q8N8F7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.33■□□□□ 0.68
LSMEM1Q8N8F7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
LSMEM1Q8N8F7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.33■□□□□ 0.68
LSMEM1Q8N8F7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
LSMEM1Q8N8F7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LSMEM1Q8N8F7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.33■□□□□ 0.68
LSMEM1Q8N8F7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LSMEM1Q8N8F7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LSMEM1Q8N8F7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSMEM1Q8N8F7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LSMEM1Q8N8F7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSMEM1Q8N8F7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSMEM1Q8N8F7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.32■□□□□ 0.68
LSMEM1Q8N8F7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSMEM1Q8N8F7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSMEM1Q8N8F7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSMEM1Q8N8F7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSMEM1Q8N8F7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSMEM1Q8N8F7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSMEM1Q8N8F7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSMEM1Q8N8F7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.32■□□□□ 0.68
LSMEM1Q8N8F7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LSMEM1Q8N8F7 AC005224.4-201ENST00000583262 1652 ntBASIC19.32■□□□□ 0.68
LSMEM1Q8N8F7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSMEM1Q8N8F7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
LSMEM1Q8N8F7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSMEM1Q8N8F7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
LSMEM1Q8N8F7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSMEM1Q8N8F7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.31■□□□□ 0.68
LSMEM1Q8N8F7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSMEM1Q8N8F7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LSMEM1Q8N8F7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
LSMEM1Q8N8F7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LSMEM1Q8N8F7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSMEM1Q8N8F7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
LSMEM1Q8N8F7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
LSMEM1Q8N8F7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
LSMEM1Q8N8F7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSMEM1Q8N8F7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSMEM1Q8N8F7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.31■□□□□ 0.68
LSMEM1Q8N8F7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LSMEM1Q8N8F7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.31■□□□□ 0.68
LSMEM1Q8N8F7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
LSMEM1Q8N8F7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LSMEM1Q8N8F7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSMEM1Q8N8F7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms