Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.57■□□□□ 0.24
C3orf56Q8N813 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.57■□□□□ 0.24
C3orf56Q8N813 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
C3orf56Q8N813 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.57■□□□□ 0.24
C3orf56Q8N813 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
C3orf56Q8N813 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
C3orf56Q8N813 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
C3orf56Q8N813 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
C3orf56Q8N813 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
C3orf56Q8N813 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C3orf56Q8N813 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.56■□□□□ 0.24
C3orf56Q8N813 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
C3orf56Q8N813 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
C3orf56Q8N813 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.56■□□□□ 0.24
C3orf56Q8N813 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.56■□□□□ 0.24
C3orf56Q8N813 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.56■□□□□ 0.24
C3orf56Q8N813 RPPH1-201ENST00000516869 333 ntBASIC16.56■□□□□ 0.24
C3orf56Q8N813 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C3orf56Q8N813 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.56■□□□□ 0.24
C3orf56Q8N813 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
C3orf56Q8N813 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.56■□□□□ 0.24
C3orf56Q8N813 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.56■□□□□ 0.24
C3orf56Q8N813 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C3orf56Q8N813 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
C3orf56Q8N813 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
C3orf56Q8N813 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.56■□□□□ 0.24
C3orf56Q8N813 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
C3orf56Q8N813 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
C3orf56Q8N813 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC16.56■□□□□ 0.24
C3orf56Q8N813 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C3orf56Q8N813 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
C3orf56Q8N813 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C3orf56Q8N813 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C3orf56Q8N813 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
C3orf56Q8N813 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
C3orf56Q8N813 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC16.55■□□□□ 0.24
C3orf56Q8N813 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
C3orf56Q8N813 LINC00543-201ENST00000567234 1845 ntBASIC16.55■□□□□ 0.24
C3orf56Q8N813 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C3orf56Q8N813 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C3orf56Q8N813 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C3orf56Q8N813 KRT17P3-201ENST00000420566 1262 ntBASIC16.55■□□□□ 0.24
C3orf56Q8N813 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.55■□□□□ 0.24
C3orf56Q8N813 AC079089.2-201ENST00000531211 1277 ntBASIC16.55■□□□□ 0.24
C3orf56Q8N813 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.55■□□□□ 0.24
C3orf56Q8N813 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.55■□□□□ 0.24
C3orf56Q8N813 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.55■□□□□ 0.24
C3orf56Q8N813 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.55■□□□□ 0.24
C3orf56Q8N813 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.55■□□□□ 0.24
C3orf56Q8N813 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
C3orf56Q8N813 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
C3orf56Q8N813 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.55■□□□□ 0.24
C3orf56Q8N813 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC16.55■□□□□ 0.24
C3orf56Q8N813 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
C3orf56Q8N813 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C3orf56Q8N813 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
C3orf56Q8N813 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
C3orf56Q8N813 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
C3orf56Q8N813 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.54■□□□□ 0.24
C3orf56Q8N813 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
C3orf56Q8N813 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C3orf56Q8N813 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
C3orf56Q8N813 SNORA78-201ENST00000459373 127 ntBASIC16.54■□□□□ 0.24
C3orf56Q8N813 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.54■□□□□ 0.24
C3orf56Q8N813 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.54■□□□□ 0.24
C3orf56Q8N813 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C3orf56Q8N813 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
C3orf56Q8N813 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
C3orf56Q8N813 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
C3orf56Q8N813 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C3orf56Q8N813 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C3orf56Q8N813 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C3orf56Q8N813 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C3orf56Q8N813 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.53■□□□□ 0.24
C3orf56Q8N813 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.53■□□□□ 0.24
C3orf56Q8N813 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.53■□□□□ 0.24
C3orf56Q8N813 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
C3orf56Q8N813 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C3orf56Q8N813 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
C3orf56Q8N813 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.53■□□□□ 0.24
C3orf56Q8N813 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.53■□□□□ 0.24
C3orf56Q8N813 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.53■□□□□ 0.24
C3orf56Q8N813 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.53■□□□□ 0.24
C3orf56Q8N813 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.53■□□□□ 0.24
C3orf56Q8N813 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C3orf56Q8N813 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C3orf56Q8N813 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC16.53■□□□□ 0.24
C3orf56Q8N813 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
C3orf56Q8N813 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
C3orf56Q8N813 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
C3orf56Q8N813 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
C3orf56Q8N813 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
C3orf56Q8N813 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
C3orf56Q8N813 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.52■□□□□ 0.24
C3orf56Q8N813 POU5F1P4-201ENST00000413175 1085 ntBASIC16.52■□□□□ 0.24
C3orf56Q8N813 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
C3orf56Q8N813 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.52■□□□□ 0.24
C3orf56Q8N813 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.52■□□□□ 0.24
C3orf56Q8N813 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.52■□□□□ 0.24
C3orf56Q8N813 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms