Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAM1L1Q8N609 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAM1L1Q8N609 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAM1L1Q8N609 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TRAM1L1Q8N609 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAM1L1Q8N609 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAM1L1Q8N609 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAM1L1Q8N609 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAM1L1Q8N609 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRAM1L1Q8N609 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.95■□□□□ 0.94
TRAM1L1Q8N609 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.95■□□□□ 0.94
TRAM1L1Q8N609 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRAM1L1Q8N609 KRT18P20-201ENST00000548986 1279 ntBASIC20.95■□□□□ 0.94
TRAM1L1Q8N609 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.95■□□□□ 0.94
TRAM1L1Q8N609 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAM1L1Q8N609 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.95■□□□□ 0.94
TRAM1L1Q8N609 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.95■□□□□ 0.94
TRAM1L1Q8N609 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAM1L1Q8N609 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAM1L1Q8N609 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAM1L1Q8N609 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TRAM1L1Q8N609 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAM1L1Q8N609 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAM1L1Q8N609 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAM1L1Q8N609 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAM1L1Q8N609 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.94■□□□□ 0.94
TRAM1L1Q8N609 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.94■□□□□ 0.94
TRAM1L1Q8N609 POU5F1P4-201ENST00000413175 1085 ntBASIC20.94■□□□□ 0.94
TRAM1L1Q8N609 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAM1L1Q8N609 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAM1L1Q8N609 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.94■□□□□ 0.94
TRAM1L1Q8N609 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.94■□□□□ 0.94
TRAM1L1Q8N609 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAM1L1Q8N609 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAM1L1Q8N609 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAM1L1Q8N609 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
TRAM1L1Q8N609 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TRAM1L1Q8N609 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.93■□□□□ 0.94
TRAM1L1Q8N609 FBXW4P1-201ENST00000426721 2239 ntBASIC20.93■□□□□ 0.94
TRAM1L1Q8N609 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.93■□□□□ 0.94
TRAM1L1Q8N609 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.93■□□□□ 0.94
TRAM1L1Q8N609 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRAM1L1Q8N609 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.93■□□□□ 0.94
TRAM1L1Q8N609 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.93■□□□□ 0.94
TRAM1L1Q8N609 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.93■□□□□ 0.94
TRAM1L1Q8N609 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRAM1L1Q8N609 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.93■□□□□ 0.94
TRAM1L1Q8N609 AC016769.1-201ENST00000409132 1010 ntBASIC20.93■□□□□ 0.94
TRAM1L1Q8N609 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAM1L1Q8N609 AC006015.1-201ENST00000429970 570 ntBASIC20.93■□□□□ 0.94
TRAM1L1Q8N609 KRT18P11-201ENST00000435214 1283 ntBASIC20.93■□□□□ 0.94
TRAM1L1Q8N609 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.93■□□□□ 0.94
TRAM1L1Q8N609 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.93■□□□□ 0.94
TRAM1L1Q8N609 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRAM1L1Q8N609 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAM1L1Q8N609 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TRAM1L1Q8N609 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAM1L1Q8N609 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TRAM1L1Q8N609 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAM1L1Q8N609 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
TRAM1L1Q8N609 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.92■□□□□ 0.94
TRAM1L1Q8N609 AC244015.2-201ENST00000616358 1861 ntBASIC20.92■□□□□ 0.94
TRAM1L1Q8N609 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TRAM1L1Q8N609 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAM1L1Q8N609 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAM1L1Q8N609 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAM1L1Q8N609 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRAM1L1Q8N609 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.92■□□□□ 0.94
TRAM1L1Q8N609 AC092666.2-201ENST00000613287 246 ntBASIC20.92■□□□□ 0.94
TRAM1L1Q8N609 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAM1L1Q8N609 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRAM1L1Q8N609 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.92■□□□□ 0.94
TRAM1L1Q8N609 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRAM1L1Q8N609 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TRAM1L1Q8N609 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAM1L1Q8N609 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.92■□□□□ 0.94
TRAM1L1Q8N609 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.92■□□□□ 0.94
TRAM1L1Q8N609 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.92■□□□□ 0.94
TRAM1L1Q8N609 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAM1L1Q8N609 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAM1L1Q8N609 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAM1L1Q8N609 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAM1L1Q8N609 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRAM1L1Q8N609 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAM1L1Q8N609 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
TRAM1L1Q8N609 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.91■□□□□ 0.94
TRAM1L1Q8N609 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.91■□□□□ 0.94
TRAM1L1Q8N609 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRAM1L1Q8N609 IKBKGP1-201ENST00000612193 1073 ntBASIC20.91■□□□□ 0.94
TRAM1L1Q8N609 AC120498.10-201ENST00000621827 505 ntBASIC20.91■□□□□ 0.94
TRAM1L1Q8N609 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAM1L1Q8N609 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.91■□□□□ 0.94
TRAM1L1Q8N609 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
TRAM1L1Q8N609 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAM1L1Q8N609 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAM1L1Q8N609 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAM1L1Q8N609 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAM1L1Q8N609 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.9■□□□□ 0.94
TRAM1L1Q8N609 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAM1L1Q8N609 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms