Protein–RNA interactions for Protein: Q8N4B4

FBXO39, F-box only protein 39, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39Q8N4B4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.11■□□□□ 0.97
FBXO39Q8N4B4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FBXO39Q8N4B4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
FBXO39Q8N4B4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FBXO39Q8N4B4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FBXO39Q8N4B4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FBXO39Q8N4B4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FBXO39Q8N4B4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FBXO39Q8N4B4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.1■□□□□ 0.97
FBXO39Q8N4B4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.1■□□□□ 0.97
FBXO39Q8N4B4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FBXO39Q8N4B4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.1■□□□□ 0.97
FBXO39Q8N4B4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
FBXO39Q8N4B4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FBXO39Q8N4B4 AC010141.3-201ENST00000456659 717 ntBASIC21.1■□□□□ 0.97
FBXO39Q8N4B4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.1■□□□□ 0.97
FBXO39Q8N4B4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FBXO39Q8N4B4 AC026310.3-201ENST00000625186 2373 ntBASIC21.1■□□□□ 0.97
FBXO39Q8N4B4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FBXO39Q8N4B4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FBXO39Q8N4B4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
FBXO39Q8N4B4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FBXO39Q8N4B4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
FBXO39Q8N4B4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
FBXO39Q8N4B4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
FBXO39Q8N4B4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
FBXO39Q8N4B4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
FBXO39Q8N4B4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
FBXO39Q8N4B4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
FBXO39Q8N4B4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.09■□□□□ 0.97
FBXO39Q8N4B4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
FBXO39Q8N4B4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FBXO39Q8N4B4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FBXO39Q8N4B4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.08■□□□□ 0.97
FBXO39Q8N4B4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FBXO39Q8N4B4 AC016769.1-201ENST00000409132 1010 ntBASIC21.08■□□□□ 0.97
FBXO39Q8N4B4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
FBXO39Q8N4B4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
FBXO39Q8N4B4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
FBXO39Q8N4B4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
FBXO39Q8N4B4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FBXO39Q8N4B4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
FBXO39Q8N4B4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
FBXO39Q8N4B4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FBXO39Q8N4B4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
FBXO39Q8N4B4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FBXO39Q8N4B4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.07■□□□□ 0.96
FBXO39Q8N4B4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.07■□□□□ 0.96
FBXO39Q8N4B4 AC137761.2-201ENST00000561729 223 ntBASIC21.07■□□□□ 0.96
FBXO39Q8N4B4 AC145350.3-201ENST00000569033 163 ntBASIC21.07■□□□□ 0.96
FBXO39Q8N4B4 AC080038.1-201ENST00000611274 1154 ntBASIC21.07■□□□□ 0.96
FBXO39Q8N4B4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FBXO39Q8N4B4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
FBXO39Q8N4B4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FBXO39Q8N4B4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
FBXO39Q8N4B4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.06■□□□□ 0.96
FBXO39Q8N4B4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
FBXO39Q8N4B4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.06■□□□□ 0.96
FBXO39Q8N4B4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
FBXO39Q8N4B4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FBXO39Q8N4B4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.06■□□□□ 0.96
FBXO39Q8N4B4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
FBXO39Q8N4B4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.06■□□□□ 0.96
FBXO39Q8N4B4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.06■□□□□ 0.96
FBXO39Q8N4B4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.06■□□□□ 0.96
FBXO39Q8N4B4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
FBXO39Q8N4B4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.06■□□□□ 0.96
FBXO39Q8N4B4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FBXO39Q8N4B4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.06■□□□□ 0.96
FBXO39Q8N4B4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.05■□□□□ 0.96
FBXO39Q8N4B4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
FBXO39Q8N4B4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
FBXO39Q8N4B4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
FBXO39Q8N4B4 HLA-L-209ENST00000420110 1011 ntBASIC21.05■□□□□ 0.96
FBXO39Q8N4B4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.05■□□□□ 0.96
FBXO39Q8N4B4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.05■□□□□ 0.96
FBXO39Q8N4B4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.05■□□□□ 0.96
FBXO39Q8N4B4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.05■□□□□ 0.96
FBXO39Q8N4B4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
FBXO39Q8N4B4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
FBXO39Q8N4B4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FBXO39Q8N4B4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
FBXO39Q8N4B4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FBXO39Q8N4B4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FBXO39Q8N4B4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FBXO39Q8N4B4 OXCT2P1-201ENST00000447263 1535 ntBASIC21.04■□□□□ 0.96
FBXO39Q8N4B4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.04■□□□□ 0.96
FBXO39Q8N4B4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FBXO39Q8N4B4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
FBXO39Q8N4B4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FBXO39Q8N4B4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.04■□□□□ 0.96
FBXO39Q8N4B4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
FBXO39Q8N4B4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
FBXO39Q8N4B4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
FBXO39Q8N4B4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FBXO39Q8N4B4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.04■□□□□ 0.96
FBXO39Q8N4B4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
FBXO39Q8N4B4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
FBXO39Q8N4B4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FBXO39Q8N4B4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms