Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE9Q8IYJ1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CPNE9Q8IYJ1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.89■□□□□ 0.94
CPNE9Q8IYJ1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.89■□□□□ 0.94
CPNE9Q8IYJ1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CPNE9Q8IYJ1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CPNE9Q8IYJ1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CPNE9Q8IYJ1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPNE9Q8IYJ1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.89■□□□□ 0.93
CPNE9Q8IYJ1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPNE9Q8IYJ1 AC055733.4-201ENST00000638462 1354 ntBASIC20.89■□□□□ 0.93
CPNE9Q8IYJ1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.89■□□□□ 0.93
CPNE9Q8IYJ1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPNE9Q8IYJ1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
CPNE9Q8IYJ1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPNE9Q8IYJ1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
CPNE9Q8IYJ1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CPNE9Q8IYJ1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE9Q8IYJ1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.88■□□□□ 0.93
CPNE9Q8IYJ1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE9Q8IYJ1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE9Q8IYJ1 AC005229.4-201ENST00000610085 2198 ntBASIC20.88■□□□□ 0.93
CPNE9Q8IYJ1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE9Q8IYJ1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.88■□□□□ 0.93
CPNE9Q8IYJ1 AL354811.1-201ENST00000610286 706 ntBASIC20.88■□□□□ 0.93
CPNE9Q8IYJ1 MIR6084-201ENST00000622012 110 ntBASIC20.88■□□□□ 0.93
CPNE9Q8IYJ1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.88■□□□□ 0.93
CPNE9Q8IYJ1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE9Q8IYJ1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE9Q8IYJ1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE9Q8IYJ1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.87■□□□□ 0.93
CPNE9Q8IYJ1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.87■□□□□ 0.93
CPNE9Q8IYJ1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CPNE9Q8IYJ1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CPNE9Q8IYJ1 AF106564.1-201ENST00000607058 2553 ntBASIC20.87■□□□□ 0.93
CPNE9Q8IYJ1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.87■□□□□ 0.93
CPNE9Q8IYJ1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE9Q8IYJ1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE9Q8IYJ1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE9Q8IYJ1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE9Q8IYJ1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE9Q8IYJ1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.86■□□□□ 0.93
CPNE9Q8IYJ1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE9Q8IYJ1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE9Q8IYJ1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.86■□□□□ 0.93
CPNE9Q8IYJ1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE9Q8IYJ1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CPNE9Q8IYJ1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE9Q8IYJ1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.86■□□□□ 0.93
CPNE9Q8IYJ1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.86■□□□□ 0.93
CPNE9Q8IYJ1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.86■□□□□ 0.93
CPNE9Q8IYJ1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.86■□□□□ 0.93
CPNE9Q8IYJ1 FEM1AP4-201ENST00000443167 1987 ntBASIC20.86■□□□□ 0.93
CPNE9Q8IYJ1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.86■□□□□ 0.93
CPNE9Q8IYJ1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE9Q8IYJ1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE9Q8IYJ1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CPNE9Q8IYJ1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.86■□□□□ 0.93
CPNE9Q8IYJ1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE9Q8IYJ1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE9Q8IYJ1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE9Q8IYJ1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE9Q8IYJ1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE9Q8IYJ1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE9Q8IYJ1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.85■□□□□ 0.93
CPNE9Q8IYJ1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE9Q8IYJ1 IRS3P-201ENST00000223076 1006 ntBASIC20.85■□□□□ 0.93
CPNE9Q8IYJ1 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.85■□□□□ 0.93
CPNE9Q8IYJ1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.85■□□□□ 0.93
CPNE9Q8IYJ1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.85■□□□□ 0.93
CPNE9Q8IYJ1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.85■□□□□ 0.93
CPNE9Q8IYJ1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE9Q8IYJ1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.85■□□□□ 0.93
CPNE9Q8IYJ1 AL358852.1-201ENST00000623174 1268 ntBASIC20.85■□□□□ 0.93
CPNE9Q8IYJ1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.85■□□□□ 0.93
CPNE9Q8IYJ1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE9Q8IYJ1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
CPNE9Q8IYJ1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE9Q8IYJ1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CPNE9Q8IYJ1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE9Q8IYJ1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.84■□□□□ 0.93
CPNE9Q8IYJ1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE9Q8IYJ1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE9Q8IYJ1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE9Q8IYJ1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE9Q8IYJ1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE9Q8IYJ1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE9Q8IYJ1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE9Q8IYJ1 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.84■□□□□ 0.93
CPNE9Q8IYJ1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE9Q8IYJ1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
CPNE9Q8IYJ1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.84■□□□□ 0.93
CPNE9Q8IYJ1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE9Q8IYJ1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE9Q8IYJ1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE9Q8IYJ1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CPNE9Q8IYJ1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CPNE9Q8IYJ1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPNE9Q8IYJ1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CPNE9Q8IYJ1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms