Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
DHX40Q8IX18 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DHX40Q8IX18 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC23.52■■□□□ 1.36
DHX40Q8IX18 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
DHX40Q8IX18 AC131281.2-201ENST00000520478 145 ntBASIC23.52■■□□□ 1.36
DHX40Q8IX18 MIR3621-201ENST00000580529 85 ntBASIC23.52■■□□□ 1.36
DHX40Q8IX18 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.52■■□□□ 1.36
DHX40Q8IX18 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
DHX40Q8IX18 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
DHX40Q8IX18 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DHX40Q8IX18 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
DHX40Q8IX18 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
DHX40Q8IX18 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
DHX40Q8IX18 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC23.51■■□□□ 1.35
DHX40Q8IX18 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
DHX40Q8IX18 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
DHX40Q8IX18 AP005212.1-201ENST00000581547 1997 ntBASIC23.51■■□□□ 1.35
DHX40Q8IX18 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
DHX40Q8IX18 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.51■■□□□ 1.35
DHX40Q8IX18 AL034346.1-201ENST00000568244 1277 ntBASIC23.51■■□□□ 1.35
DHX40Q8IX18 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.51■■□□□ 1.35
DHX40Q8IX18 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.51■■□□□ 1.35
DHX40Q8IX18 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
DHX40Q8IX18 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
DHX40Q8IX18 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC23.51■■□□□ 1.35
DHX40Q8IX18 AC073314.1-201ENST00000568729 2216 ntBASIC23.51■■□□□ 1.35
DHX40Q8IX18 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
DHX40Q8IX18 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
DHX40Q8IX18 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
DHX40Q8IX18 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DHX40Q8IX18 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DHX40Q8IX18 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DHX40Q8IX18 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
DHX40Q8IX18 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DHX40Q8IX18 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.5■■□□□ 1.35
DHX40Q8IX18 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.5■■□□□ 1.35
DHX40Q8IX18 AL356740.2-201ENST00000601559 647 ntBASIC23.5■■□□□ 1.35
DHX40Q8IX18 PLK5-205ENST00000642079 1969 ntBASIC23.5■■□□□ 1.35
DHX40Q8IX18 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DHX40Q8IX18 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
DHX40Q8IX18 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
DHX40Q8IX18 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DHX40Q8IX18 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
DHX40Q8IX18 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
DHX40Q8IX18 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
DHX40Q8IX18 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
DHX40Q8IX18 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
DHX40Q8IX18 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
DHX40Q8IX18 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
DHX40Q8IX18 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
DHX40Q8IX18 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
DHX40Q8IX18 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.49■■□□□ 1.35
DHX40Q8IX18 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
DHX40Q8IX18 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.49■■□□□ 1.35
DHX40Q8IX18 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
DHX40Q8IX18 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
DHX40Q8IX18 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.49■■□□□ 1.35
DHX40Q8IX18 GABARAPL3-202ENST00000624044 1851 ntBASIC23.49■■□□□ 1.35
DHX40Q8IX18 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC23.49■■□□□ 1.35
DHX40Q8IX18 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
DHX40Q8IX18 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
DHX40Q8IX18 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
DHX40Q8IX18 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
DHX40Q8IX18 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC23.48■■□□□ 1.35
DHX40Q8IX18 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
DHX40Q8IX18 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.48■■□□□ 1.35
DHX40Q8IX18 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.48■■□□□ 1.35
DHX40Q8IX18 AC006128.1-201ENST00000624704 1661 ntBASIC23.48■■□□□ 1.35
DHX40Q8IX18 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.47■■□□□ 1.35
DHX40Q8IX18 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DHX40Q8IX18 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
DHX40Q8IX18 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
DHX40Q8IX18 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DHX40Q8IX18 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
DHX40Q8IX18 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
DHX40Q8IX18 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
DHX40Q8IX18 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
DHX40Q8IX18 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.47■■□□□ 1.35
DHX40Q8IX18 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
DHX40Q8IX18 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC23.47■■□□□ 1.35
DHX40Q8IX18 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.47■■□□□ 1.35
DHX40Q8IX18 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
DHX40Q8IX18 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.46■■□□□ 1.35
DHX40Q8IX18 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
DHX40Q8IX18 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
DHX40Q8IX18 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
DHX40Q8IX18 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
DHX40Q8IX18 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.46■■□□□ 1.35
DHX40Q8IX18 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.46■■□□□ 1.35
DHX40Q8IX18 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.46■■□□□ 1.35
DHX40Q8IX18 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
DHX40Q8IX18 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
DHX40Q8IX18 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.45■■□□□ 1.35
DHX40Q8IX18 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC23.45■■□□□ 1.35
DHX40Q8IX18 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC23.45■■□□□ 1.35
DHX40Q8IX18 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
DHX40Q8IX18 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
DHX40Q8IX18 AP006587.3-201ENST00000525742 1516 ntBASIC23.45■■□□□ 1.34
DHX40Q8IX18 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
DHX40Q8IX18 AL136116.3-201ENST00000402907 1138 ntBASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms