Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.13■□□□□ 0.65
RP1L1Q8IWN7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RP1L1Q8IWN7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RP1L1Q8IWN7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.13■□□□□ 0.65
RP1L1Q8IWN7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.13■□□□□ 0.65
RP1L1Q8IWN7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RP1L1Q8IWN7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RP1L1Q8IWN7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.13■□□□□ 0.65
RP1L1Q8IWN7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.12■□□□□ 0.65
RP1L1Q8IWN7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.12■□□□□ 0.65
RP1L1Q8IWN7 AC097658.1-201ENST00000475555 843 ntBASIC19.12■□□□□ 0.65
RP1L1Q8IWN7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RP1L1Q8IWN7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.12■□□□□ 0.65
RP1L1Q8IWN7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RP1L1Q8IWN7 AC073648.6-201ENST00000641589 218 ntBASIC19.12■□□□□ 0.65
RP1L1Q8IWN7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.12■□□□□ 0.65
RP1L1Q8IWN7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
RP1L1Q8IWN7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RP1L1Q8IWN7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RP1L1Q8IWN7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.11■□□□□ 0.65
RP1L1Q8IWN7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.11■□□□□ 0.65
RP1L1Q8IWN7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.11■□□□□ 0.65
RP1L1Q8IWN7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.11■□□□□ 0.65
RP1L1Q8IWN7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RP1L1Q8IWN7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RP1L1Q8IWN7 AC092068.2-201ENST00000590491 1708 ntBASIC19.11■□□□□ 0.65
RP1L1Q8IWN7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RP1L1Q8IWN7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RP1L1Q8IWN7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RP1L1Q8IWN7 AP004607.7-201ENST00000527152 1677 ntBASIC19.11■□□□□ 0.65
RP1L1Q8IWN7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.11■□□□□ 0.65
RP1L1Q8IWN7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RP1L1Q8IWN7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RP1L1Q8IWN7 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.11■□□□□ 0.65
RP1L1Q8IWN7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.11■□□□□ 0.65
RP1L1Q8IWN7 AC069236.1-201ENST00000604339 616 ntBASIC19.11■□□□□ 0.65
RP1L1Q8IWN7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
RP1L1Q8IWN7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.11■□□□□ 0.65
RP1L1Q8IWN7 KRT16P2-201ENST00000414673 1423 ntBASIC19.11■□□□□ 0.65
RP1L1Q8IWN7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
RP1L1Q8IWN7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
RP1L1Q8IWN7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RP1L1Q8IWN7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RP1L1Q8IWN7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RP1L1Q8IWN7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.1■□□□□ 0.65
RP1L1Q8IWN7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RP1L1Q8IWN7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.1■□□□□ 0.65
RP1L1Q8IWN7 AC073912.3-201ENST00000624414 853 ntBASIC19.1■□□□□ 0.65
RP1L1Q8IWN7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RP1L1Q8IWN7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.1■□□□□ 0.65
RP1L1Q8IWN7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
RP1L1Q8IWN7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RP1L1Q8IWN7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RP1L1Q8IWN7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RP1L1Q8IWN7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RP1L1Q8IWN7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.1■□□□□ 0.65
RP1L1Q8IWN7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RP1L1Q8IWN7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RP1L1Q8IWN7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RP1L1Q8IWN7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.09■□□□□ 0.65
RP1L1Q8IWN7 MIR1224-201ENST00000408193 85 ntBASIC19.09■□□□□ 0.65
RP1L1Q8IWN7 MIPEPP3-201ENST00000412105 444 ntBASIC19.09■□□□□ 0.65
RP1L1Q8IWN7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.09■□□□□ 0.65
RP1L1Q8IWN7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.09■□□□□ 0.65
RP1L1Q8IWN7 AL034346.1-201ENST00000568244 1277 ntBASIC19.09■□□□□ 0.65
RP1L1Q8IWN7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RP1L1Q8IWN7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RP1L1Q8IWN7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RP1L1Q8IWN7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RP1L1Q8IWN7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RP1L1Q8IWN7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.09■□□□□ 0.65
RP1L1Q8IWN7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.09■□□□□ 0.65
RP1L1Q8IWN7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.08■□□□□ 0.65
RP1L1Q8IWN7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RP1L1Q8IWN7 AC012618.2-201ENST00000428058 849 ntBASIC19.08■□□□□ 0.65
RP1L1Q8IWN7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.08■□□□□ 0.65
RP1L1Q8IWN7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RP1L1Q8IWN7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RP1L1Q8IWN7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RP1L1Q8IWN7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RP1L1Q8IWN7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
RP1L1Q8IWN7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
RP1L1Q8IWN7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RP1L1Q8IWN7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RP1L1Q8IWN7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.08■□□□□ 0.64
RP1L1Q8IWN7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.08■□□□□ 0.64
RP1L1Q8IWN7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
RP1L1Q8IWN7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.08■□□□□ 0.64
RP1L1Q8IWN7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RP1L1Q8IWN7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RP1L1Q8IWN7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RP1L1Q8IWN7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RP1L1Q8IWN7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RP1L1Q8IWN7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RP1L1Q8IWN7 PKD1P6-201ENST00000343738 4769 ntBASIC19.07■□□□□ 0.64
RP1L1Q8IWN7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RP1L1Q8IWN7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RP1L1Q8IWN7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RP1L1Q8IWN7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RP1L1Q8IWN7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms