Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.69■□□□□ 0.58
LINC00346Q8IVM7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
LINC00346Q8IVM7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.69■□□□□ 0.58
LINC00346Q8IVM7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.69■□□□□ 0.58
LINC00346Q8IVM7 AC105233.4-201ENST00000642045 216 ntBASIC18.69■□□□□ 0.58
LINC00346Q8IVM7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00346Q8IVM7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00346Q8IVM7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00346Q8IVM7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00346Q8IVM7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00346Q8IVM7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
LINC00346Q8IVM7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00346Q8IVM7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00346Q8IVM7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00346Q8IVM7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.68■□□□□ 0.58
LINC00346Q8IVM7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC00346Q8IVM7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LINC00346Q8IVM7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC00346Q8IVM7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.68■□□□□ 0.58
LINC00346Q8IVM7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.68■□□□□ 0.58
LINC00346Q8IVM7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
LINC00346Q8IVM7 AL355001.2-201ENST00000620617 1191 ntBASIC18.68■□□□□ 0.58
LINC00346Q8IVM7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC00346Q8IVM7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.68■□□□□ 0.58
LINC00346Q8IVM7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC00346Q8IVM7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LINC00346Q8IVM7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC00346Q8IVM7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC00346Q8IVM7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LINC00346Q8IVM7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC00346Q8IVM7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC00346Q8IVM7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LINC00346Q8IVM7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC00346Q8IVM7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.67■□□□□ 0.58
LINC00346Q8IVM7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LINC00346Q8IVM7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
LINC00346Q8IVM7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
LINC00346Q8IVM7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC00346Q8IVM7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.67■□□□□ 0.58
LINC00346Q8IVM7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC00346Q8IVM7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.67■□□□□ 0.58
LINC00346Q8IVM7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.67■□□□□ 0.58
LINC00346Q8IVM7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
LINC00346Q8IVM7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.67■□□□□ 0.58
LINC00346Q8IVM7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
LINC00346Q8IVM7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC00346Q8IVM7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.67■□□□□ 0.58
LINC00346Q8IVM7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
LINC00346Q8IVM7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
LINC00346Q8IVM7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LINC00346Q8IVM7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC00346Q8IVM7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LINC00346Q8IVM7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.66■□□□□ 0.58
LINC00346Q8IVM7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.66■□□□□ 0.58
LINC00346Q8IVM7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LINC00346Q8IVM7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.66■□□□□ 0.58
LINC00346Q8IVM7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LINC00346Q8IVM7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
LINC00346Q8IVM7 MIR939-201ENST00000401314 82 ntBASIC18.66■□□□□ 0.58
LINC00346Q8IVM7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.66■□□□□ 0.58
LINC00346Q8IVM7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.66■□□□□ 0.58
LINC00346Q8IVM7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LINC00346Q8IVM7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.66■□□□□ 0.58
LINC00346Q8IVM7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.66■□□□□ 0.58
LINC00346Q8IVM7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
LINC00346Q8IVM7 RASA4CP-201ENST00000424092 1398 ntBASIC18.66■□□□□ 0.58
LINC00346Q8IVM7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
LINC00346Q8IVM7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LINC00346Q8IVM7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00346Q8IVM7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00346Q8IVM7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LINC00346Q8IVM7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00346Q8IVM7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00346Q8IVM7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
LINC00346Q8IVM7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00346Q8IVM7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00346Q8IVM7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.65■□□□□ 0.58
LINC00346Q8IVM7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.65■□□□□ 0.58
LINC00346Q8IVM7 AL031432.3-201ENST00000607698 485 ntBASIC18.65■□□□□ 0.58
LINC00346Q8IVM7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.65■□□□□ 0.58
LINC00346Q8IVM7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00346Q8IVM7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.65■□□□□ 0.58
LINC00346Q8IVM7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.65■□□□□ 0.58
LINC00346Q8IVM7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00346Q8IVM7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LINC00346Q8IVM7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LINC00346Q8IVM7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
LINC00346Q8IVM7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.64■□□□□ 0.58
LINC00346Q8IVM7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC00346Q8IVM7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC00346Q8IVM7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.64■□□□□ 0.57
LINC00346Q8IVM7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC00346Q8IVM7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
LINC00346Q8IVM7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
LINC00346Q8IVM7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
LINC00346Q8IVM7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LINC00346Q8IVM7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.64■□□□□ 0.57
LINC00346Q8IVM7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.64■□□□□ 0.57
LINC00346Q8IVM7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC00346Q8IVM7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms