Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB43Q86YS6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.12■□□□□ 0.81
RAB43Q86YS6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB43Q86YS6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
RAB43Q86YS6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RAB43Q86YS6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB43Q86YS6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB43Q86YS6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB43Q86YS6 AL034346.1-201ENST00000568244 1277 ntBASIC20.11■□□□□ 0.81
RAB43Q86YS6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB43Q86YS6 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
RAB43Q86YS6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RAB43Q86YS6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RAB43Q86YS6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB43Q86YS6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RAB43Q86YS6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RAB43Q86YS6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RAB43Q86YS6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RAB43Q86YS6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB43Q86YS6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RAB43Q86YS6 GUSBP5-202ENST00000510805 1989 ntBASIC20.1■□□□□ 0.81
RAB43Q86YS6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB43Q86YS6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAB43Q86YS6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB43Q86YS6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB43Q86YS6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RAB43Q86YS6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB43Q86YS6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB43Q86YS6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.1■□□□□ 0.81
RAB43Q86YS6 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.1■□□□□ 0.81
RAB43Q86YS6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.1■□□□□ 0.81
RAB43Q86YS6 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.1■□□□□ 0.81
RAB43Q86YS6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.1■□□□□ 0.81
RAB43Q86YS6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.1■□□□□ 0.81
RAB43Q86YS6 AL121603.2-201ENST00000557373 2117 ntBASIC20.1■□□□□ 0.81
RAB43Q86YS6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.1■□□□□ 0.81
RAB43Q86YS6 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.1■□□□□ 0.81
RAB43Q86YS6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.1■□□□□ 0.81
RAB43Q86YS6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB43Q86YS6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB43Q86YS6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB43Q86YS6 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB43Q86YS6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.1■□□□□ 0.81
RAB43Q86YS6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.1■□□□□ 0.81
RAB43Q86YS6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB43Q86YS6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB43Q86YS6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAB43Q86YS6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB43Q86YS6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB43Q86YS6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.09■□□□□ 0.81
RAB43Q86YS6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.09■□□□□ 0.81
RAB43Q86YS6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB43Q86YS6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.09■□□□□ 0.81
RAB43Q86YS6 OR7E47P-201ENST00000546390 1422 ntBASIC20.09■□□□□ 0.81
RAB43Q86YS6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.08■□□□□ 0.81
RAB43Q86YS6 AL137060.1-201ENST00000618151 2648 ntBASIC20.08■□□□□ 0.81
RAB43Q86YS6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB43Q86YS6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB43Q86YS6 AP004607.7-201ENST00000527152 1677 ntBASIC20.08■□□□□ 0.81
RAB43Q86YS6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB43Q86YS6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB43Q86YS6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.08■□□□□ 0.81
RAB43Q86YS6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB43Q86YS6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.08■□□□□ 0.81
RAB43Q86YS6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
RAB43Q86YS6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAB43Q86YS6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.08■□□□□ 0.8
RAB43Q86YS6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAB43Q86YS6 ECEL1P1-201ENST00000373592 1742 ntBASIC20.07■□□□□ 0.8
RAB43Q86YS6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAB43Q86YS6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.07■□□□□ 0.8
RAB43Q86YS6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.07■□□□□ 0.8
RAB43Q86YS6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
RAB43Q86YS6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.07■□□□□ 0.8
RAB43Q86YS6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAB43Q86YS6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB43Q86YS6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
RAB43Q86YS6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
RAB43Q86YS6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB43Q86YS6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
RAB43Q86YS6 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB43Q86YS6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.07■□□□□ 0.8
RAB43Q86YS6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB43Q86YS6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB43Q86YS6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.06■□□□□ 0.8
RAB43Q86YS6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.06■□□□□ 0.8
RAB43Q86YS6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAB43Q86YS6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAB43Q86YS6 MIR663A-201ENST00000385250 93 ntBASIC20.06■□□□□ 0.8
RAB43Q86YS6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RAB43Q86YS6 CROCCP5-201ENST00000436658 830 ntBASIC20.06■□□□□ 0.8
RAB43Q86YS6 MFSD11-216ENST00000590393 1141 ntBASIC20.06■□□□□ 0.8
RAB43Q86YS6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB43Q86YS6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB43Q86YS6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB43Q86YS6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB43Q86YS6 AC055733.4-201ENST00000638462 1354 ntBASIC20.06■□□□□ 0.8
RAB43Q86YS6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB43Q86YS6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB43Q86YS6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms