Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 SPIB-206ENST00000596074 847 ntTSL 2 BASIC26.91■■□□□ 1.9
COL23A1Q86Y22 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC26.91■■□□□ 1.9
COL23A1Q86Y22 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
COL23A1Q86Y22 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.91■■□□□ 1.9
COL23A1Q86Y22 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
COL23A1Q86Y22 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC26.9■■□□□ 1.9
COL23A1Q86Y22 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
COL23A1Q86Y22 KRT16P2-201ENST00000414673 1423 ntBASIC26.9■■□□□ 1.9
COL23A1Q86Y22 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
COL23A1Q86Y22 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
COL23A1Q86Y22 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
COL23A1Q86Y22 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.9■■□□□ 1.9
COL23A1Q86Y22 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC26.9■■□□□ 1.9
COL23A1Q86Y22 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC26.9■■□□□ 1.9
COL23A1Q86Y22 AC233263.1-201ENST00000578059 224 ntBASIC26.9■■□□□ 1.9
COL23A1Q86Y22 HLA-B-256ENST00000639848 1089 ntBASIC26.9■■□□□ 1.9
COL23A1Q86Y22 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
COL23A1Q86Y22 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
COL23A1Q86Y22 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.89■■□□□ 1.9
COL23A1Q86Y22 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
COL23A1Q86Y22 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
COL23A1Q86Y22 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
COL23A1Q86Y22 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
COL23A1Q86Y22 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC26.89■■□□□ 1.9
COL23A1Q86Y22 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC26.89■■□□□ 1.9
COL23A1Q86Y22 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC26.89■■□□□ 1.9
COL23A1Q86Y22 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC26.89■■□□□ 1.9
COL23A1Q86Y22 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
COL23A1Q86Y22 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC26.89■■□□□ 1.9
COL23A1Q86Y22 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26.89■■□□□ 1.9
COL23A1Q86Y22 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
COL23A1Q86Y22 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
COL23A1Q86Y22 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
COL23A1Q86Y22 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
COL23A1Q86Y22 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC26.88■■□□□ 1.89
COL23A1Q86Y22 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC26.88■■□□□ 1.89
COL23A1Q86Y22 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC26.88■■□□□ 1.89
COL23A1Q86Y22 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
COL23A1Q86Y22 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
COL23A1Q86Y22 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
COL23A1Q86Y22 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC26.87■■□□□ 1.89
COL23A1Q86Y22 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC26.87■■□□□ 1.89
COL23A1Q86Y22 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC26.87■■□□□ 1.89
COL23A1Q86Y22 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
COL23A1Q86Y22 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
COL23A1Q86Y22 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC26.87■■□□□ 1.89
COL23A1Q86Y22 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
COL23A1Q86Y22 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
COL23A1Q86Y22 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
COL23A1Q86Y22 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
COL23A1Q86Y22 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
COL23A1Q86Y22 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
COL23A1Q86Y22 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC26.86■■□□□ 1.89
COL23A1Q86Y22 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC26.86■■□□□ 1.89
COL23A1Q86Y22 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC26.86■■□□□ 1.89
COL23A1Q86Y22 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC26.86■■□□□ 1.89
COL23A1Q86Y22 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
COL23A1Q86Y22 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
COL23A1Q86Y22 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
COL23A1Q86Y22 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC26.85■■□□□ 1.89
COL23A1Q86Y22 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC26.85■■□□□ 1.89
COL23A1Q86Y22 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
COL23A1Q86Y22 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
COL23A1Q86Y22 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
COL23A1Q86Y22 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
COL23A1Q86Y22 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC26.85■■□□□ 1.89
COL23A1Q86Y22 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC26.85■■□□□ 1.89
COL23A1Q86Y22 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
COL23A1Q86Y22 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
COL23A1Q86Y22 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC26.85■■□□□ 1.89
COL23A1Q86Y22 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
COL23A1Q86Y22 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
COL23A1Q86Y22 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC26.84■■□□□ 1.89
COL23A1Q86Y22 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
COL23A1Q86Y22 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
COL23A1Q86Y22 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
COL23A1Q86Y22 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC26.84■■□□□ 1.89
COL23A1Q86Y22 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC26.84■■□□□ 1.89
COL23A1Q86Y22 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC26.84■■□□□ 1.89
COL23A1Q86Y22 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
COL23A1Q86Y22 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
COL23A1Q86Y22 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
COL23A1Q86Y22 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC26.84■■□□□ 1.89
COL23A1Q86Y22 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC26.84■■□□□ 1.89
COL23A1Q86Y22 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
COL23A1Q86Y22 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
COL23A1Q86Y22 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
COL23A1Q86Y22 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
COL23A1Q86Y22 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
COL23A1Q86Y22 KRT17P3-201ENST00000420566 1262 ntBASIC26.83■■□□□ 1.89
COL23A1Q86Y22 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC26.83■■□□□ 1.89
COL23A1Q86Y22 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC26.83■■□□□ 1.89
COL23A1Q86Y22 CD44-222ENST00000526025 1052 ntTSL 2 BASIC26.83■■□□□ 1.89
COL23A1Q86Y22 PNMA6B-201ENST00000538162 1200 ntBASIC26.83■■□□□ 1.89
COL23A1Q86Y22 BX088651.1-201ENST00000540551 451 ntBASIC26.83■■□□□ 1.89
COL23A1Q86Y22 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC26.83■■□□□ 1.89
COL23A1Q86Y22 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC26.83■■□□□ 1.89
COL23A1Q86Y22 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
COL23A1Q86Y22 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
COL23A1Q86Y22 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC26.82■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms