Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.03■□□□□ 0.96
ZC3HC1Q86WB0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.03■□□□□ 0.96
ZC3HC1Q86WB0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.02■□□□□ 0.96
ZC3HC1Q86WB0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.02■□□□□ 0.96
ZC3HC1Q86WB0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.02■□□□□ 0.96
ZC3HC1Q86WB0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZC3HC1Q86WB0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZC3HC1Q86WB0 AC055733.4-201ENST00000638462 1354 ntBASIC21.02■□□□□ 0.96
ZC3HC1Q86WB0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
ZC3HC1Q86WB0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZC3HC1Q86WB0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.02■□□□□ 0.96
ZC3HC1Q86WB0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.02■□□□□ 0.96
ZC3HC1Q86WB0 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.02■□□□□ 0.96
ZC3HC1Q86WB0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
ZC3HC1Q86WB0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZC3HC1Q86WB0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZC3HC1Q86WB0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.02■□□□□ 0.96
ZC3HC1Q86WB0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZC3HC1Q86WB0 PKD1P6-201ENST00000343738 4769 ntBASIC21.02■□□□□ 0.95
ZC3HC1Q86WB0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
ZC3HC1Q86WB0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
ZC3HC1Q86WB0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
ZC3HC1Q86WB0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZC3HC1Q86WB0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.01■□□□□ 0.95
ZC3HC1Q86WB0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZC3HC1Q86WB0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZC3HC1Q86WB0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.01■□□□□ 0.95
ZC3HC1Q86WB0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZC3HC1Q86WB0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZC3HC1Q86WB0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.01■□□□□ 0.95
ZC3HC1Q86WB0 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.01■□□□□ 0.95
ZC3HC1Q86WB0 AP001330.3-201ENST00000520123 633 ntBASIC21.01■□□□□ 0.95
ZC3HC1Q86WB0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.01■□□□□ 0.95
ZC3HC1Q86WB0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZC3HC1Q86WB0 TSPY26P-201ENST00000476365 1326 ntBASIC21.01■□□□□ 0.95
ZC3HC1Q86WB0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.01■□□□□ 0.95
ZC3HC1Q86WB0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZC3HC1Q86WB0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZC3HC1Q86WB0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21■□□□□ 0.95
ZC3HC1Q86WB0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZC3HC1Q86WB0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21■□□□□ 0.95
ZC3HC1Q86WB0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZC3HC1Q86WB0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21■□□□□ 0.95
ZC3HC1Q86WB0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
ZC3HC1Q86WB0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZC3HC1Q86WB0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ZC3HC1Q86WB0 EDA-201ENST00000338901 1233 ntBASIC21■□□□□ 0.95
ZC3HC1Q86WB0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21■□□□□ 0.95
ZC3HC1Q86WB0 MAG-206ENST00000597035 542 ntTSL 4 BASIC21■□□□□ 0.95
ZC3HC1Q86WB0 AC105233.4-201ENST00000642045 216 ntBASIC21■□□□□ 0.95
ZC3HC1Q86WB0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZC3HC1Q86WB0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZC3HC1Q86WB0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
ZC3HC1Q86WB0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZC3HC1Q86WB0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21■□□□□ 0.95
ZC3HC1Q86WB0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZC3HC1Q86WB0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ZC3HC1Q86WB0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.99■□□□□ 0.95
ZC3HC1Q86WB0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.99■□□□□ 0.95
ZC3HC1Q86WB0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZC3HC1Q86WB0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZC3HC1Q86WB0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
ZC3HC1Q86WB0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZC3HC1Q86WB0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.99■□□□□ 0.95
ZC3HC1Q86WB0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.99■□□□□ 0.95
ZC3HC1Q86WB0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.99■□□□□ 0.95
ZC3HC1Q86WB0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.99■□□□□ 0.95
ZC3HC1Q86WB0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ZC3HC1Q86WB0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZC3HC1Q86WB0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZC3HC1Q86WB0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZC3HC1Q86WB0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZC3HC1Q86WB0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZC3HC1Q86WB0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ZC3HC1Q86WB0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZC3HC1Q86WB0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZC3HC1Q86WB0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZC3HC1Q86WB0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZC3HC1Q86WB0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZC3HC1Q86WB0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
ZC3HC1Q86WB0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
ZC3HC1Q86WB0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.98■□□□□ 0.95
ZC3HC1Q86WB0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZC3HC1Q86WB0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.98■□□□□ 0.95
ZC3HC1Q86WB0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.98■□□□□ 0.95
ZC3HC1Q86WB0 AC110285.6-201ENST00000617652 491 ntBASIC20.98■□□□□ 0.95
ZC3HC1Q86WB0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZC3HC1Q86WB0 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZC3HC1Q86WB0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.98■□□□□ 0.95
ZC3HC1Q86WB0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ZC3HC1Q86WB0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ZC3HC1Q86WB0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZC3HC1Q86WB0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.97■□□□□ 0.95
ZC3HC1Q86WB0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.97■□□□□ 0.95
ZC3HC1Q86WB0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZC3HC1Q86WB0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZC3HC1Q86WB0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZC3HC1Q86WB0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZC3HC1Q86WB0 AC005224.4-201ENST00000583262 1652 ntBASIC20.97■□□□□ 0.95
ZC3HC1Q86WB0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms