Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
LRRTM4Q86VH4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRTM4Q86VH4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRTM4Q86VH4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRTM4Q86VH4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRRTM4Q86VH4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRRTM4Q86VH4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRTM4Q86VH4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRTM4Q86VH4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRRTM4Q86VH4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.78■□□□□ 0.92
LRRTM4Q86VH4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.78■□□□□ 0.92
LRRTM4Q86VH4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
LRRTM4Q86VH4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.78■□□□□ 0.92
LRRTM4Q86VH4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.78■□□□□ 0.92
LRRTM4Q86VH4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRTM4Q86VH4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.78■□□□□ 0.92
LRRTM4Q86VH4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRTM4Q86VH4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRRTM4Q86VH4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
LRRTM4Q86VH4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRTM4Q86VH4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.77■□□□□ 0.92
LRRTM4Q86VH4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRTM4Q86VH4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
LRRTM4Q86VH4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.77■□□□□ 0.92
LRRTM4Q86VH4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRRTM4Q86VH4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.77■□□□□ 0.92
LRRTM4Q86VH4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRTM4Q86VH4 POU5F1P4-201ENST00000413175 1085 ntBASIC20.77■□□□□ 0.92
LRRTM4Q86VH4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.77■□□□□ 0.92
LRRTM4Q86VH4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.77■□□□□ 0.92
LRRTM4Q86VH4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.77■□□□□ 0.92
LRRTM4Q86VH4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRRTM4Q86VH4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRRTM4Q86VH4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRRTM4Q86VH4 BID-214ENST00000617586 542 ntTSL 5 BASIC20.77■□□□□ 0.92
LRRTM4Q86VH4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRTM4Q86VH4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRRTM4Q86VH4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRRTM4Q86VH4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
LRRTM4Q86VH4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
LRRTM4Q86VH4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LRRTM4Q86VH4 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.77■□□□□ 0.91
LRRTM4Q86VH4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.76■□□□□ 0.91
LRRTM4Q86VH4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRTM4Q86VH4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRTM4Q86VH4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRTM4Q86VH4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRRTM4Q86VH4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.76■□□□□ 0.91
LRRTM4Q86VH4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRRTM4Q86VH4 AC120498.10-201ENST00000621827 505 ntBASIC20.76■□□□□ 0.91
LRRTM4Q86VH4 MYCNOS-205ENST00000641950 531 ntBASIC20.76■□□□□ 0.91
LRRTM4Q86VH4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRRTM4Q86VH4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRTM4Q86VH4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
LRRTM4Q86VH4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRRTM4Q86VH4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.75■□□□□ 0.91
LRRTM4Q86VH4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRTM4Q86VH4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
LRRTM4Q86VH4 EP400NL-214ENST00000641289 2402 ntBASIC20.75■□□□□ 0.91
LRRTM4Q86VH4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
LRRTM4Q86VH4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.75■□□□□ 0.91
LRRTM4Q86VH4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
LRRTM4Q86VH4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
LRRTM4Q86VH4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRTM4Q86VH4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRRTM4Q86VH4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.75■□□□□ 0.91
LRRTM4Q86VH4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.75■□□□□ 0.91
LRRTM4Q86VH4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.75■□□□□ 0.91
LRRTM4Q86VH4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.75■□□□□ 0.91
LRRTM4Q86VH4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRTM4Q86VH4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRTM4Q86VH4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
LRRTM4Q86VH4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRTM4Q86VH4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRTM4Q86VH4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.74■□□□□ 0.91
LRRTM4Q86VH4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRTM4Q86VH4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRTM4Q86VH4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.74■□□□□ 0.91
LRRTM4Q86VH4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
LRRTM4Q86VH4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.74■□□□□ 0.91
LRRTM4Q86VH4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRTM4Q86VH4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.74■□□□□ 0.91
LRRTM4Q86VH4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.74■□□□□ 0.91
LRRTM4Q86VH4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.74■□□□□ 0.91
LRRTM4Q86VH4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.74■□□□□ 0.91
LRRTM4Q86VH4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRRTM4Q86VH4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRRTM4Q86VH4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRTM4Q86VH4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRTM4Q86VH4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.73■□□□□ 0.91
LRRTM4Q86VH4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.73■□□□□ 0.91
LRRTM4Q86VH4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
LRRTM4Q86VH4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRRTM4Q86VH4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRTM4Q86VH4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.73■□□□□ 0.91
LRRTM4Q86VH4 SLC7A5P2-201ENST00000553010 536 ntBASIC20.73■□□□□ 0.91
LRRTM4Q86VH4 AC080038.1-201ENST00000611274 1154 ntBASIC20.73■□□□□ 0.91
LRRTM4Q86VH4 AC011767.1-201ENST00000617410 1153 ntBASIC20.73■□□□□ 0.91
LRRTM4Q86VH4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRRTM4Q86VH4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms