Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF550Q7Z398 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
ZNF550Q7Z398 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
ZNF550Q7Z398 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.45■□□□□ 0.7
ZNF550Q7Z398 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF550Q7Z398 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.45■□□□□ 0.7
ZNF550Q7Z398 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF550Q7Z398 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ZNF550Q7Z398 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.45■□□□□ 0.7
ZNF550Q7Z398 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF550Q7Z398 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF550Q7Z398 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF550Q7Z398 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
ZNF550Q7Z398 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF550Q7Z398 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF550Q7Z398 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF550Q7Z398 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF550Q7Z398 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.44■□□□□ 0.7
ZNF550Q7Z398 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF550Q7Z398 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.44■□□□□ 0.7
ZNF550Q7Z398 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.44■□□□□ 0.7
ZNF550Q7Z398 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF550Q7Z398 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.44■□□□□ 0.7
ZNF550Q7Z398 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
ZNF550Q7Z398 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF550Q7Z398 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ZNF550Q7Z398 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.43■□□□□ 0.7
ZNF550Q7Z398 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ZNF550Q7Z398 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF550Q7Z398 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF550Q7Z398 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF550Q7Z398 BX005040.4-201ENST00000637145 1518 ntBASIC19.43■□□□□ 0.7
ZNF550Q7Z398 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF550Q7Z398 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.43■□□□□ 0.7
ZNF550Q7Z398 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
ZNF550Q7Z398 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.43■□□□□ 0.7
ZNF550Q7Z398 AL162430.1-201ENST00000480705 870 ntBASIC19.43■□□□□ 0.7
ZNF550Q7Z398 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ZNF550Q7Z398 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF550Q7Z398 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF550Q7Z398 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF550Q7Z398 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF550Q7Z398 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.42■□□□□ 0.7
ZNF550Q7Z398 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF550Q7Z398 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
ZNF550Q7Z398 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ZNF550Q7Z398 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.42■□□□□ 0.7
ZNF550Q7Z398 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
ZNF550Q7Z398 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF550Q7Z398 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.42■□□□□ 0.7
ZNF550Q7Z398 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ZNF550Q7Z398 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ZNF550Q7Z398 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF550Q7Z398 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF550Q7Z398 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
ZNF550Q7Z398 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF550Q7Z398 AL137060.1-201ENST00000618151 2648 ntBASIC19.41■□□□□ 0.7
ZNF550Q7Z398 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF550Q7Z398 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF550Q7Z398 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
ZNF550Q7Z398 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF550Q7Z398 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF550Q7Z398 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.41■□□□□ 0.7
ZNF550Q7Z398 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF550Q7Z398 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.41■□□□□ 0.7
ZNF550Q7Z398 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.41■□□□□ 0.7
ZNF550Q7Z398 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF550Q7Z398 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.41■□□□□ 0.7
ZNF550Q7Z398 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.41■□□□□ 0.7
ZNF550Q7Z398 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.41■□□□□ 0.7
ZNF550Q7Z398 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.41■□□□□ 0.7
ZNF550Q7Z398 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
ZNF550Q7Z398 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF550Q7Z398 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF550Q7Z398 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ZNF550Q7Z398 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF550Q7Z398 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF550Q7Z398 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
ZNF550Q7Z398 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF550Q7Z398 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF550Q7Z398 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.4■□□□□ 0.7
ZNF550Q7Z398 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.4■□□□□ 0.7
ZNF550Q7Z398 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ZNF550Q7Z398 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.4■□□□□ 0.7
ZNF550Q7Z398 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF550Q7Z398 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF550Q7Z398 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF550Q7Z398 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ZNF550Q7Z398 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF550Q7Z398 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.4■□□□□ 0.7
ZNF550Q7Z398 AC005224.4-201ENST00000583262 1652 ntBASIC19.4■□□□□ 0.7
ZNF550Q7Z398 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ZNF550Q7Z398 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
ZNF550Q7Z398 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.39■□□□□ 0.7
ZNF550Q7Z398 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF550Q7Z398 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.39■□□□□ 0.69
ZNF550Q7Z398 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF550Q7Z398 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.39■□□□□ 0.69
ZNF550Q7Z398 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF550Q7Z398 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms