Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTCHD4Q6ZW05 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTCHD4Q6ZW05 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTCHD4Q6ZW05 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTCHD4Q6ZW05 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTCHD4Q6ZW05 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTCHD4Q6ZW05 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.39■□□□□ 0.69
PTCHD4Q6ZW05 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.39■□□□□ 0.69
PTCHD4Q6ZW05 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.39■□□□□ 0.69
PTCHD4Q6ZW05 OXCT2P1-201ENST00000447263 1535 ntBASIC19.39■□□□□ 0.69
PTCHD4Q6ZW05 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PTCHD4Q6ZW05 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTCHD4Q6ZW05 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 SRD5A1P1-201ENST00000442297 786 ntBASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 AL356441.2-201ENST00000443009 864 ntBASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTCHD4Q6ZW05 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTCHD4Q6ZW05 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.35■□□□□ 0.69
PTCHD4Q6ZW05 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTCHD4Q6ZW05 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.35■□□□□ 0.69
PTCHD4Q6ZW05 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.35■□□□□ 0.69
PTCHD4Q6ZW05 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTCHD4Q6ZW05 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTCHD4Q6ZW05 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTCHD4Q6ZW05 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTCHD4Q6ZW05 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.35■□□□□ 0.69
PTCHD4Q6ZW05 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 FEM1AP1-201ENST00000431297 1995 ntBASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms