Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTCHD4Q6ZW05 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTCHD4Q6ZW05 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTCHD4Q6ZW05 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTCHD4Q6ZW05 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTCHD4Q6ZW05 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTCHD4Q6ZW05 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.39■□□□□ 0.69
PTCHD4Q6ZW05 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.39■□□□□ 0.69
PTCHD4Q6ZW05 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.39■□□□□ 0.69
PTCHD4Q6ZW05 OXCT2P1-201ENST00000447263 1535 ntBASIC19.39■□□□□ 0.69
PTCHD4Q6ZW05 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PTCHD4Q6ZW05 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTCHD4Q6ZW05 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCHD4Q6ZW05 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTCHD4Q6ZW05 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 SRD5A1P1-201ENST00000442297 786 ntBASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 AL356441.2-201ENST00000443009 864 ntBASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PTCHD4Q6ZW05 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTCHD4Q6ZW05 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTCHD4Q6ZW05 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.35■□□□□ 0.69
PTCHD4Q6ZW05 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTCHD4Q6ZW05 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.35■□□□□ 0.69
PTCHD4Q6ZW05 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.35■□□□□ 0.69
PTCHD4Q6ZW05 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTCHD4Q6ZW05 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTCHD4Q6ZW05 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTCHD4Q6ZW05 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTCHD4Q6ZW05 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.35■□□□□ 0.69
PTCHD4Q6ZW05 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 FEM1AP1-201ENST00000431297 1995 ntBASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms