Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 TERF1P2-201ENST00000583350 1212 ntBASIC18.25■□□□□ 0.51
COLCA1Q6ZS62 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.25■□□□□ 0.51
COLCA1Q6ZS62 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COLCA1Q6ZS62 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COLCA1Q6ZS62 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COLCA1Q6ZS62 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COLCA1Q6ZS62 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.25■□□□□ 0.51
COLCA1Q6ZS62 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.25■□□□□ 0.51
COLCA1Q6ZS62 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.24■□□□□ 0.51
COLCA1Q6ZS62 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.24■□□□□ 0.51
COLCA1Q6ZS62 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COLCA1Q6ZS62 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.24■□□□□ 0.51
COLCA1Q6ZS62 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COLCA1Q6ZS62 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.24■□□□□ 0.51
COLCA1Q6ZS62 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COLCA1Q6ZS62 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COLCA1Q6ZS62 AC079140.4-201ENST00000507448 529 ntBASIC18.24■□□□□ 0.51
COLCA1Q6ZS62 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COLCA1Q6ZS62 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
COLCA1Q6ZS62 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COLCA1Q6ZS62 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COLCA1Q6ZS62 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.24■□□□□ 0.51
COLCA1Q6ZS62 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
COLCA1Q6ZS62 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COLCA1Q6ZS62 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COLCA1Q6ZS62 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COLCA1Q6ZS62 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COLCA1Q6ZS62 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.23■□□□□ 0.51
COLCA1Q6ZS62 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.23■□□□□ 0.51
COLCA1Q6ZS62 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.23■□□□□ 0.51
COLCA1Q6ZS62 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COLCA1Q6ZS62 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.23■□□□□ 0.51
COLCA1Q6ZS62 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.23■□□□□ 0.51
COLCA1Q6ZS62 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COLCA1Q6ZS62 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.23■□□□□ 0.51
COLCA1Q6ZS62 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
COLCA1Q6ZS62 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.23■□□□□ 0.51
COLCA1Q6ZS62 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
COLCA1Q6ZS62 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.22■□□□□ 0.51
COLCA1Q6ZS62 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COLCA1Q6ZS62 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COLCA1Q6ZS62 KRT87P-202ENST00000534226 1464 ntBASIC18.22■□□□□ 0.51
COLCA1Q6ZS62 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
COLCA1Q6ZS62 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COLCA1Q6ZS62 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COLCA1Q6ZS62 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
COLCA1Q6ZS62 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COLCA1Q6ZS62 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.22■□□□□ 0.51
COLCA1Q6ZS62 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COLCA1Q6ZS62 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COLCA1Q6ZS62 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COLCA1Q6ZS62 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.22■□□□□ 0.51
COLCA1Q6ZS62 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.22■□□□□ 0.51
COLCA1Q6ZS62 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COLCA1Q6ZS62 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COLCA1Q6ZS62 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COLCA1Q6ZS62 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
COLCA1Q6ZS62 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COLCA1Q6ZS62 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COLCA1Q6ZS62 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
COLCA1Q6ZS62 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COLCA1Q6ZS62 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COLCA1Q6ZS62 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COLCA1Q6ZS62 AL024507.2-201ENST00000606070 2574 ntBASIC18.21■□□□□ 0.51
COLCA1Q6ZS62 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COLCA1Q6ZS62 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COLCA1Q6ZS62 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COLCA1Q6ZS62 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.21■□□□□ 0.51
COLCA1Q6ZS62 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.21■□□□□ 0.51
COLCA1Q6ZS62 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.21■□□□□ 0.51
COLCA1Q6ZS62 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COLCA1Q6ZS62 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.21■□□□□ 0.51
COLCA1Q6ZS62 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.21■□□□□ 0.51
COLCA1Q6ZS62 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
COLCA1Q6ZS62 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COLCA1Q6ZS62 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.21■□□□□ 0.51
COLCA1Q6ZS62 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COLCA1Q6ZS62 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
COLCA1Q6ZS62 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COLCA1Q6ZS62 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
COLCA1Q6ZS62 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
COLCA1Q6ZS62 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.21■□□□□ 0.5
COLCA1Q6ZS62 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COLCA1Q6ZS62 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
COLCA1Q6ZS62 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COLCA1Q6ZS62 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
COLCA1Q6ZS62 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
COLCA1Q6ZS62 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
COLCA1Q6ZS62 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
COLCA1Q6ZS62 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COLCA1Q6ZS62 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.2■□□□□ 0.5
COLCA1Q6ZS62 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
COLCA1Q6ZS62 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.2■□□□□ 0.5
COLCA1Q6ZS62 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COLCA1Q6ZS62 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.2■□□□□ 0.5
COLCA1Q6ZS62 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.2■□□□□ 0.5
COLCA1Q6ZS62 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COLCA1Q6ZS62 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
COLCA1Q6ZS62 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COLCA1Q6ZS62 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 198.7 ms