Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.9■■□□□ 1.1
FOXR1Q6PIV2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.9■■□□□ 1.1
FOXR1Q6PIV2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
FOXR1Q6PIV2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.9■■□□□ 1.1
FOXR1Q6PIV2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
FOXR1Q6PIV2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.89■■□□□ 1.1
FOXR1Q6PIV2 RASA4CP-201ENST00000424092 1398 ntBASIC21.89■■□□□ 1.1
FOXR1Q6PIV2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
FOXR1Q6PIV2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.89■■□□□ 1.1
FOXR1Q6PIV2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
FOXR1Q6PIV2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
FOXR1Q6PIV2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.89■■□□□ 1.09
FOXR1Q6PIV2 AC087623.3-201ENST00000607047 1098 ntBASIC21.89■■□□□ 1.09
FOXR1Q6PIV2 MIR6821-201ENST00000617625 74 ntBASIC21.89■■□□□ 1.09
FOXR1Q6PIV2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
FOXR1Q6PIV2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
FOXR1Q6PIV2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
FOXR1Q6PIV2 AC131274.2-201ENST00000580697 1507 ntBASIC21.89■■□□□ 1.09
FOXR1Q6PIV2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
FOXR1Q6PIV2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
FOXR1Q6PIV2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXR1Q6PIV2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.88■■□□□ 1.09
FOXR1Q6PIV2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXR1Q6PIV2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXR1Q6PIV2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXR1Q6PIV2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXR1Q6PIV2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.88■■□□□ 1.09
FOXR1Q6PIV2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
FOXR1Q6PIV2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.88■■□□□ 1.09
FOXR1Q6PIV2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
FOXR1Q6PIV2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
FOXR1Q6PIV2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
FOXR1Q6PIV2 AC027682.1-201ENST00000562846 899 ntBASIC21.88■■□□□ 1.09
FOXR1Q6PIV2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.88■■□□□ 1.09
FOXR1Q6PIV2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.88■■□□□ 1.09
FOXR1Q6PIV2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.88■■□□□ 1.09
FOXR1Q6PIV2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXR1Q6PIV2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXR1Q6PIV2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXR1Q6PIV2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.88■■□□□ 1.09
FOXR1Q6PIV2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.88■■□□□ 1.09
FOXR1Q6PIV2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.88■■□□□ 1.09
FOXR1Q6PIV2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXR1Q6PIV2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXR1Q6PIV2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXR1Q6PIV2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXR1Q6PIV2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
FOXR1Q6PIV2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
FOXR1Q6PIV2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXR1Q6PIV2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXR1Q6PIV2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXR1Q6PIV2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXR1Q6PIV2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXR1Q6PIV2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXR1Q6PIV2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXR1Q6PIV2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
FOXR1Q6PIV2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXR1Q6PIV2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
FOXR1Q6PIV2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
FOXR1Q6PIV2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXR1Q6PIV2 AC099791.1-201ENST00000416440 715 ntBASIC21.86■■□□□ 1.09
FOXR1Q6PIV2 AC097381.1-201ENST00000429019 1296 ntBASIC21.86■■□□□ 1.09
FOXR1Q6PIV2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
FOXR1Q6PIV2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.86■■□□□ 1.09
FOXR1Q6PIV2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.86■■□□□ 1.09
FOXR1Q6PIV2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
FOXR1Q6PIV2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
FOXR1Q6PIV2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXR1Q6PIV2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXR1Q6PIV2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXR1Q6PIV2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXR1Q6PIV2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXR1Q6PIV2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
FOXR1Q6PIV2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.85■■□□□ 1.09
FOXR1Q6PIV2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
FOXR1Q6PIV2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.85■■□□□ 1.09
FOXR1Q6PIV2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
FOXR1Q6PIV2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.85■■□□□ 1.09
FOXR1Q6PIV2 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXR1Q6PIV2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.85■■□□□ 1.09
FOXR1Q6PIV2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
FOXR1Q6PIV2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.85■■□□□ 1.09
FOXR1Q6PIV2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXR1Q6PIV2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXR1Q6PIV2 AC009102.2-201ENST00000606772 1639 ntBASIC21.84■■□□□ 1.09
FOXR1Q6PIV2 IRS3P-201ENST00000223076 1006 ntBASIC21.84■■□□□ 1.09
FOXR1Q6PIV2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
FOXR1Q6PIV2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXR1Q6PIV2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXR1Q6PIV2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
FOXR1Q6PIV2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.84■■□□□ 1.09
FOXR1Q6PIV2 AL162430.1-201ENST00000480705 870 ntBASIC21.84■■□□□ 1.09
FOXR1Q6PIV2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.84■■□□□ 1.09
FOXR1Q6PIV2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.84■■□□□ 1.09
FOXR1Q6PIV2 ALDH1A3-203ENST00000557963 1670 ntBASIC21.84■■□□□ 1.09
FOXR1Q6PIV2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
FOXR1Q6PIV2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
FOXR1Q6PIV2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
FOXR1Q6PIV2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
FOXR1Q6PIV2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms