Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
ZNF544Q6NX49 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.29■□□□□ 0.68
ZNF544Q6NX49 AC005229.4-201ENST00000610085 2198 ntBASIC19.29■□□□□ 0.68
ZNF544Q6NX49 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF544Q6NX49 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.29■□□□□ 0.68
ZNF544Q6NX49 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF544Q6NX49 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF544Q6NX49 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF544Q6NX49 MIR3181-201ENST00000578512 73 ntBASIC19.29■□□□□ 0.68
ZNF544Q6NX49 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF544Q6NX49 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.29■□□□□ 0.68
ZNF544Q6NX49 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF544Q6NX49 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.29■□□□□ 0.68
ZNF544Q6NX49 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF544Q6NX49 LINC01960-201ENST00000563759 1884 ntBASIC19.28■□□□□ 0.68
ZNF544Q6NX49 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF544Q6NX49 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
ZNF544Q6NX49 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF544Q6NX49 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
ZNF544Q6NX49 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF544Q6NX49 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF544Q6NX49 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF544Q6NX49 AC105265.2-201ENST00000467189 838 ntBASIC19.28■□□□□ 0.68
ZNF544Q6NX49 DUX4L4-201ENST00000566884 1269 ntBASIC19.28■□□□□ 0.68
ZNF544Q6NX49 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ZNF544Q6NX49 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF544Q6NX49 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF544Q6NX49 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ZNF544Q6NX49 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
ZNF544Q6NX49 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF544Q6NX49 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF544Q6NX49 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.27■□□□□ 0.68
ZNF544Q6NX49 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF544Q6NX49 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
ZNF544Q6NX49 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF544Q6NX49 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF544Q6NX49 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF544Q6NX49 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF544Q6NX49 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.27■□□□□ 0.68
ZNF544Q6NX49 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.27■□□□□ 0.68
ZNF544Q6NX49 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF544Q6NX49 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ZNF544Q6NX49 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF544Q6NX49 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
ZNF544Q6NX49 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF544Q6NX49 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
ZNF544Q6NX49 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
ZNF544Q6NX49 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF544Q6NX49 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF544Q6NX49 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.26■□□□□ 0.67
ZNF544Q6NX49 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF544Q6NX49 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF544Q6NX49 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF544Q6NX49 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF544Q6NX49 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF544Q6NX49 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF544Q6NX49 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF544Q6NX49 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.26■□□□□ 0.67
ZNF544Q6NX49 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF544Q6NX49 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
ZNF544Q6NX49 pRNA.6-201ENST00000610482 90 ntBASIC19.26■□□□□ 0.67
ZNF544Q6NX49 CA15P2-201ENST00000611168 834 ntBASIC19.26■□□□□ 0.67
ZNF544Q6NX49 pRNA.5-201ENST00000612139 90 ntBASIC19.26■□□□□ 0.67
ZNF544Q6NX49 pRNA.11-201ENST00000618423 90 ntBASIC19.26■□□□□ 0.67
ZNF544Q6NX49 pRNA.13-201ENST00000619112 90 ntBASIC19.26■□□□□ 0.67
ZNF544Q6NX49 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
ZNF544Q6NX49 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ZNF544Q6NX49 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF544Q6NX49 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF544Q6NX49 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF544Q6NX49 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF544Q6NX49 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF544Q6NX49 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
ZNF544Q6NX49 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ZNF544Q6NX49 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF544Q6NX49 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF544Q6NX49 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF544Q6NX49 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF544Q6NX49 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF544Q6NX49 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF544Q6NX49 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.25■□□□□ 0.67
ZNF544Q6NX49 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF544Q6NX49 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF544Q6NX49 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF544Q6NX49 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF544Q6NX49 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ZNF544Q6NX49 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF544Q6NX49 BX842568.3-201ENST00000418104 571 ntBASIC19.24■□□□□ 0.67
ZNF544Q6NX49 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.24■□□□□ 0.67
ZNF544Q6NX49 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.24■□□□□ 0.67
ZNF544Q6NX49 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.24■□□□□ 0.67
ZNF544Q6NX49 AC008764.7-201ENST00000593779 1081 ntBASIC19.24■□□□□ 0.67
ZNF544Q6NX49 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.24■□□□□ 0.67
ZNF544Q6NX49 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.24■□□□□ 0.67
ZNF544Q6NX49 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF544Q6NX49 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF544Q6NX49 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF544Q6NX49 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF544Q6NX49 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF544Q6NX49 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms