Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.64■■□□□ 1.37
SWSAP1Q6NVH7 AC010536.3-201ENST00000620306 533 ntBASIC23.64■■□□□ 1.37
SWSAP1Q6NVH7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SWSAP1Q6NVH7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.64■■□□□ 1.37
SWSAP1Q6NVH7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SWSAP1Q6NVH7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SWSAP1Q6NVH7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.63■■□□□ 1.37
SWSAP1Q6NVH7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SWSAP1Q6NVH7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SWSAP1Q6NVH7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.63■■□□□ 1.37
SWSAP1Q6NVH7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SWSAP1Q6NVH7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SWSAP1Q6NVH7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.63■■□□□ 1.37
SWSAP1Q6NVH7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SWSAP1Q6NVH7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.63■■□□□ 1.37
SWSAP1Q6NVH7 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.63■■□□□ 1.37
SWSAP1Q6NVH7 AC006970.2-201ENST00000450065 779 ntBASIC23.63■■□□□ 1.37
SWSAP1Q6NVH7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.63■■□□□ 1.37
SWSAP1Q6NVH7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.63■■□□□ 1.37
SWSAP1Q6NVH7 AC231657.2-201ENST00000624556 255 ntBASIC23.63■■□□□ 1.37
SWSAP1Q6NVH7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SWSAP1Q6NVH7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SWSAP1Q6NVH7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.62■■□□□ 1.37
SWSAP1Q6NVH7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
SWSAP1Q6NVH7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SWSAP1Q6NVH7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
SWSAP1Q6NVH7 AC061975.6-201ENST00000579045 1553 ntBASIC23.62■■□□□ 1.37
SWSAP1Q6NVH7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
SWSAP1Q6NVH7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
SWSAP1Q6NVH7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SWSAP1Q6NVH7 POU5F1P4-201ENST00000413175 1085 ntBASIC23.62■■□□□ 1.37
SWSAP1Q6NVH7 HLA-L-209ENST00000420110 1011 ntBASIC23.62■■□□□ 1.37
SWSAP1Q6NVH7 AC007322.1-201ENST00000426983 750 ntBASIC23.62■■□□□ 1.37
SWSAP1Q6NVH7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.62■■□□□ 1.37
SWSAP1Q6NVH7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.62■■□□□ 1.37
SWSAP1Q6NVH7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.62■■□□□ 1.37
SWSAP1Q6NVH7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SWSAP1Q6NVH7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
SWSAP1Q6NVH7 AC133561.1-201ENST00000568600 2415 ntBASIC23.62■■□□□ 1.37
SWSAP1Q6NVH7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SWSAP1Q6NVH7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SWSAP1Q6NVH7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SWSAP1Q6NVH7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
SWSAP1Q6NVH7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SWSAP1Q6NVH7 MIR663A-201ENST00000385250 93 ntBASIC23.61■■□□□ 1.37
SWSAP1Q6NVH7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.61■■□□□ 1.37
SWSAP1Q6NVH7 AC120498.10-201ENST00000621827 505 ntBASIC23.61■■□□□ 1.37
SWSAP1Q6NVH7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
SWSAP1Q6NVH7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.61■■□□□ 1.37
SWSAP1Q6NVH7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SWSAP1Q6NVH7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SWSAP1Q6NVH7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SWSAP1Q6NVH7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SWSAP1Q6NVH7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SWSAP1Q6NVH7 CNN2P6-201ENST00000439038 900 ntBASIC23.6■■□□□ 1.37
SWSAP1Q6NVH7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.6■■□□□ 1.37
SWSAP1Q6NVH7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.6■■□□□ 1.37
SWSAP1Q6NVH7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.6■■□□□ 1.37
SWSAP1Q6NVH7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SWSAP1Q6NVH7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SWSAP1Q6NVH7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SWSAP1Q6NVH7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SWSAP1Q6NVH7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SWSAP1Q6NVH7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.59■■□□□ 1.37
SWSAP1Q6NVH7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SWSAP1Q6NVH7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SWSAP1Q6NVH7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SWSAP1Q6NVH7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
SWSAP1Q6NVH7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SWSAP1Q6NVH7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SWSAP1Q6NVH7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.59■■□□□ 1.37
SWSAP1Q6NVH7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.59■■□□□ 1.37
SWSAP1Q6NVH7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.59■■□□□ 1.37
SWSAP1Q6NVH7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.59■■□□□ 1.37
SWSAP1Q6NVH7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.59■■□□□ 1.37
SWSAP1Q6NVH7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.59■■□□□ 1.37
SWSAP1Q6NVH7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SWSAP1Q6NVH7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.59■■□□□ 1.37
SWSAP1Q6NVH7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.59■■□□□ 1.37
SWSAP1Q6NVH7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.59■■□□□ 1.37
SWSAP1Q6NVH7 ECEL1P1-201ENST00000373592 1742 ntBASIC23.59■■□□□ 1.37
SWSAP1Q6NVH7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SWSAP1Q6NVH7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SWSAP1Q6NVH7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SWSAP1Q6NVH7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.58■■□□□ 1.37
SWSAP1Q6NVH7 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.58■■□□□ 1.37
SWSAP1Q6NVH7 TERF1P5-201ENST00000477545 1207 ntBASIC23.58■■□□□ 1.37
SWSAP1Q6NVH7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.58■■□□□ 1.37
SWSAP1Q6NVH7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.58■■□□□ 1.37
SWSAP1Q6NVH7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SWSAP1Q6NVH7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SWSAP1Q6NVH7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SWSAP1Q6NVH7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
SWSAP1Q6NVH7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
SWSAP1Q6NVH7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.58■■□□□ 1.36
SWSAP1Q6NVH7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
SWSAP1Q6NVH7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SWSAP1Q6NVH7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
SWSAP1Q6NVH7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SWSAP1Q6NVH7 NCF1B-203ENST00000435988 1254 ntBASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms