Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF43Q68DV7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RNF43Q68DV7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RNF43Q68DV7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
RNF43Q68DV7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RNF43Q68DV7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF43Q68DV7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.12■■□□□ 1.13
RNF43Q68DV7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.12■■□□□ 1.13
RNF43Q68DV7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
RNF43Q68DV7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
RNF43Q68DV7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
RNF43Q68DV7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF43Q68DV7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF43Q68DV7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF43Q68DV7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RNF43Q68DV7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF43Q68DV7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RNF43Q68DV7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.11■■□□□ 1.13
RNF43Q68DV7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RNF43Q68DV7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
RNF43Q68DV7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
RNF43Q68DV7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF43Q68DV7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
RNF43Q68DV7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
RNF43Q68DV7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.11■■□□□ 1.13
RNF43Q68DV7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.11■■□□□ 1.13
RNF43Q68DV7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.11■■□□□ 1.13
RNF43Q68DV7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
RNF43Q68DV7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF43Q68DV7 AC004854.2-201ENST00000608450 1441 ntBASIC22.11■■□□□ 1.13
RNF43Q68DV7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.11■■□□□ 1.13
RNF43Q68DV7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF43Q68DV7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF43Q68DV7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.11■■□□□ 1.13
RNF43Q68DV7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
RNF43Q68DV7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
RNF43Q68DV7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RNF43Q68DV7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF43Q68DV7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF43Q68DV7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF43Q68DV7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF43Q68DV7 OR7E47P-201ENST00000546390 1422 ntBASIC22.1■■□□□ 1.13
RNF43Q68DV7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.1■■□□□ 1.13
RNF43Q68DV7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF43Q68DV7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.1■■□□□ 1.13
RNF43Q68DV7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.1■■□□□ 1.13
RNF43Q68DV7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.1■■□□□ 1.13
RNF43Q68DV7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.1■■□□□ 1.13
RNF43Q68DV7 AC026310.3-201ENST00000625186 2373 ntBASIC22.1■■□□□ 1.13
RNF43Q68DV7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF43Q68DV7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF43Q68DV7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF43Q68DV7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF43Q68DV7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
RNF43Q68DV7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
RNF43Q68DV7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF43Q68DV7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF43Q68DV7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
RNF43Q68DV7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.09■■□□□ 1.13
RNF43Q68DV7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.09■■□□□ 1.13
RNF43Q68DV7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF43Q68DV7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF43Q68DV7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.09■■□□□ 1.13
RNF43Q68DV7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.09■■□□□ 1.13
RNF43Q68DV7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RNF43Q68DV7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.09■■□□□ 1.13
RNF43Q68DV7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.09■■□□□ 1.13
RNF43Q68DV7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
RNF43Q68DV7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF43Q68DV7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
RNF43Q68DV7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.08■■□□□ 1.13
RNF43Q68DV7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RNF43Q68DV7 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.08■■□□□ 1.13
RNF43Q68DV7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
RNF43Q68DV7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RNF43Q68DV7 AC006015.1-201ENST00000429970 570 ntBASIC22.08■■□□□ 1.13
RNF43Q68DV7 CDCA4P2-201ENST00000441182 718 ntBASIC22.08■■□□□ 1.13
RNF43Q68DV7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.08■■□□□ 1.13
RNF43Q68DV7 AC137761.2-201ENST00000561729 223 ntBASIC22.08■■□□□ 1.13
RNF43Q68DV7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.08■■□□□ 1.13
RNF43Q68DV7 AC145350.3-201ENST00000569033 163 ntBASIC22.08■■□□□ 1.13
RNF43Q68DV7 RAP2CP1-201ENST00000605103 478 ntBASIC22.08■■□□□ 1.13
RNF43Q68DV7 TMEM191A-211ENST00000637163 1067 ntBASIC22.08■■□□□ 1.13
RNF43Q68DV7 AC073111.5-205ENST00000641717 521 ntBASIC22.08■■□□□ 1.13
RNF43Q68DV7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RNF43Q68DV7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
RNF43Q68DV7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
RNF43Q68DV7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.12
RNF43Q68DV7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
RNF43Q68DV7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.07■■□□□ 1.12
RNF43Q68DV7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF43Q68DV7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF43Q68DV7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF43Q68DV7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.07■■□□□ 1.12
RNF43Q68DV7 AC079140.4-201ENST00000507448 529 ntBASIC22.07■■□□□ 1.12
RNF43Q68DV7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.07■■□□□ 1.12
RNF43Q68DV7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.07■■□□□ 1.12
RNF43Q68DV7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RNF43Q68DV7 AC104771.1-201ENST00000603335 964 ntBASIC22.07■■□□□ 1.12
RNF43Q68DV7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms