Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LYSMD4Q5XG99 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LYSMD4Q5XG99 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
LYSMD4Q5XG99 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
LYSMD4Q5XG99 UNC93B4-201ENST00000505679 747 ntBASIC20.9■□□□□ 0.94
LYSMD4Q5XG99 AP003097.1-201ENST00000530657 1135 ntBASIC20.9■□□□□ 0.94
LYSMD4Q5XG99 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LYSMD4Q5XG99 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LYSMD4Q5XG99 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LYSMD4Q5XG99 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.89■□□□□ 0.94
LYSMD4Q5XG99 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
LYSMD4Q5XG99 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.89■□□□□ 0.94
LYSMD4Q5XG99 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LYSMD4Q5XG99 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LYSMD4Q5XG99 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
LYSMD4Q5XG99 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LYSMD4Q5XG99 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.89■□□□□ 0.93
LYSMD4Q5XG99 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LYSMD4Q5XG99 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LYSMD4Q5XG99 AL596275.1-201ENST00000423464 877 ntBASIC20.89■□□□□ 0.93
LYSMD4Q5XG99 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.89■□□□□ 0.93
LYSMD4Q5XG99 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LYSMD4Q5XG99 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
LYSMD4Q5XG99 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.89■□□□□ 0.93
LYSMD4Q5XG99 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LYSMD4Q5XG99 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LYSMD4Q5XG99 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.89■□□□□ 0.93
LYSMD4Q5XG99 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.89■□□□□ 0.93
LYSMD4Q5XG99 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.89■□□□□ 0.93
LYSMD4Q5XG99 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LYSMD4Q5XG99 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
LYSMD4Q5XG99 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LYSMD4Q5XG99 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LYSMD4Q5XG99 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.88■□□□□ 0.93
LYSMD4Q5XG99 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LYSMD4Q5XG99 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LYSMD4Q5XG99 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.88■□□□□ 0.93
LYSMD4Q5XG99 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LYSMD4Q5XG99 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.88■□□□□ 0.93
LYSMD4Q5XG99 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LYSMD4Q5XG99 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.88■□□□□ 0.93
LYSMD4Q5XG99 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LYSMD4Q5XG99 AC073648.6-201ENST00000641589 218 ntBASIC20.88■□□□□ 0.93
LYSMD4Q5XG99 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LYSMD4Q5XG99 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
LYSMD4Q5XG99 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.88■□□□□ 0.93
LYSMD4Q5XG99 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.88■□□□□ 0.93
LYSMD4Q5XG99 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
LYSMD4Q5XG99 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
LYSMD4Q5XG99 AC137767.1-201ENST00000602918 1920 ntBASIC20.88■□□□□ 0.93
LYSMD4Q5XG99 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.87■□□□□ 0.93
LYSMD4Q5XG99 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LYSMD4Q5XG99 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LYSMD4Q5XG99 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.87■□□□□ 0.93
LYSMD4Q5XG99 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
LYSMD4Q5XG99 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
LYSMD4Q5XG99 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LYSMD4Q5XG99 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.87■□□□□ 0.93
LYSMD4Q5XG99 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.87■□□□□ 0.93
LYSMD4Q5XG99 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.87■□□□□ 0.93
LYSMD4Q5XG99 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.87■□□□□ 0.93
LYSMD4Q5XG99 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
LYSMD4Q5XG99 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LYSMD4Q5XG99 AC061975.6-201ENST00000579045 1553 ntBASIC20.87■□□□□ 0.93
LYSMD4Q5XG99 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
LYSMD4Q5XG99 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LYSMD4Q5XG99 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.87■□□□□ 0.93
LYSMD4Q5XG99 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LYSMD4Q5XG99 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
LYSMD4Q5XG99 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LYSMD4Q5XG99 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
LYSMD4Q5XG99 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LYSMD4Q5XG99 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LYSMD4Q5XG99 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.86■□□□□ 0.93
LYSMD4Q5XG99 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LYSMD4Q5XG99 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LYSMD4Q5XG99 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LYSMD4Q5XG99 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LYSMD4Q5XG99 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.85■□□□□ 0.93
LYSMD4Q5XG99 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LYSMD4Q5XG99 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
LYSMD4Q5XG99 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
LYSMD4Q5XG99 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
LYSMD4Q5XG99 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.85■□□□□ 0.93
LYSMD4Q5XG99 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.85■□□□□ 0.93
LYSMD4Q5XG99 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LYSMD4Q5XG99 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LYSMD4Q5XG99 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.85■□□□□ 0.93
LYSMD4Q5XG99 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
LYSMD4Q5XG99 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
LYSMD4Q5XG99 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LYSMD4Q5XG99 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LYSMD4Q5XG99 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LYSMD4Q5XG99 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.84■□□□□ 0.93
LYSMD4Q5XG99 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.84■□□□□ 0.93
LYSMD4Q5XG99 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.84■□□□□ 0.93
LYSMD4Q5XG99 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LYSMD4Q5XG99 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LYSMD4Q5XG99 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LYSMD4Q5XG99 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms