Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 AC053503.5-201ENST00000601508 636 ntBASIC20.17■□□□□ 0.82
PRAMEF17Q5VTA0 AC104771.1-201ENST00000603335 964 ntBASIC20.17■□□□□ 0.82
PRAMEF17Q5VTA0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PRAMEF17Q5VTA0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF17Q5VTA0 AC092053.2-201ENST00000640557 1818 ntBASIC20.17■□□□□ 0.82
PRAMEF17Q5VTA0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF17Q5VTA0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF17Q5VTA0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF17Q5VTA0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
PRAMEF17Q5VTA0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF17Q5VTA0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PRAMEF17Q5VTA0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF17Q5VTA0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.16■□□□□ 0.82
PRAMEF17Q5VTA0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF17Q5VTA0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.16■□□□□ 0.82
PRAMEF17Q5VTA0 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.16■□□□□ 0.82
PRAMEF17Q5VTA0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF17Q5VTA0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
PRAMEF17Q5VTA0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF17Q5VTA0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.16■□□□□ 0.82
PRAMEF17Q5VTA0 AC003102.1-202ENST00000563394 1796 ntBASIC20.16■□□□□ 0.82
PRAMEF17Q5VTA0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PRAMEF17Q5VTA0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.16■□□□□ 0.82
PRAMEF17Q5VTA0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF17Q5VTA0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.15■□□□□ 0.82
PRAMEF17Q5VTA0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF17Q5VTA0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF17Q5VTA0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PRAMEF17Q5VTA0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF17Q5VTA0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF17Q5VTA0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF17Q5VTA0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF17Q5VTA0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF17Q5VTA0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
PRAMEF17Q5VTA0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF17Q5VTA0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF17Q5VTA0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF17Q5VTA0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.14■□□□□ 0.81
PRAMEF17Q5VTA0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF17Q5VTA0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF17Q5VTA0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF17Q5VTA0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.14■□□□□ 0.81
PRAMEF17Q5VTA0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF17Q5VTA0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PRAMEF17Q5VTA0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF17Q5VTA0 NCF1B-203ENST00000435988 1254 ntBASIC20.14■□□□□ 0.81
PRAMEF17Q5VTA0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.14■□□□□ 0.81
PRAMEF17Q5VTA0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.14■□□□□ 0.81
PRAMEF17Q5VTA0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.14■□□□□ 0.81
PRAMEF17Q5VTA0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.14■□□□□ 0.81
PRAMEF17Q5VTA0 AL109923.1-201ENST00000618799 583 ntBASIC20.14■□□□□ 0.81
PRAMEF17Q5VTA0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF17Q5VTA0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PRAMEF17Q5VTA0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
PRAMEF17Q5VTA0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.14■□□□□ 0.81
PRAMEF17Q5VTA0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF17Q5VTA0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF17Q5VTA0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF17Q5VTA0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF17Q5VTA0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.13■□□□□ 0.81
PRAMEF17Q5VTA0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.13■□□□□ 0.81
PRAMEF17Q5VTA0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PRAMEF17Q5VTA0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRAMEF17Q5VTA0 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
PRAMEF17Q5VTA0 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRAMEF17Q5VTA0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRAMEF17Q5VTA0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PRAMEF17Q5VTA0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRAMEF17Q5VTA0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.13■□□□□ 0.81
PRAMEF17Q5VTA0 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.13■□□□□ 0.81
PRAMEF17Q5VTA0 CNN2P6-201ENST00000439038 900 ntBASIC20.13■□□□□ 0.81
PRAMEF17Q5VTA0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PRAMEF17Q5VTA0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.13■□□□□ 0.81
PRAMEF17Q5VTA0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PRAMEF17Q5VTA0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PRAMEF17Q5VTA0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.13■□□□□ 0.81
PRAMEF17Q5VTA0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRAMEF17Q5VTA0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRAMEF17Q5VTA0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRAMEF17Q5VTA0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PRAMEF17Q5VTA0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRAMEF17Q5VTA0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PRAMEF17Q5VTA0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRAMEF17Q5VTA0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PRAMEF17Q5VTA0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRAMEF17Q5VTA0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRAMEF17Q5VTA0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.12■□□□□ 0.81
PRAMEF17Q5VTA0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRAMEF17Q5VTA0 AC007322.1-201ENST00000426983 750 ntBASIC20.12■□□□□ 0.81
PRAMEF17Q5VTA0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.12■□□□□ 0.81
PRAMEF17Q5VTA0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.12■□□□□ 0.81
PRAMEF17Q5VTA0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.12■□□□□ 0.81
PRAMEF17Q5VTA0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.12■□□□□ 0.81
PRAMEF17Q5VTA0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PRAMEF17Q5VTA0 AC005181.1-201ENST00000604782 1256 ntBASIC20.12■□□□□ 0.81
PRAMEF17Q5VTA0 AC010536.3-201ENST00000620306 533 ntBASIC20.12■□□□□ 0.81
PRAMEF17Q5VTA0 AC231657.2-201ENST00000624556 255 ntBASIC20.12■□□□□ 0.81
PRAMEF17Q5VTA0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRAMEF17Q5VTA0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
PRAMEF17Q5VTA0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms