Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RC3H1Q5TC82 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RC3H1Q5TC82 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.91
RC3H1Q5TC82 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RC3H1Q5TC82 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RC3H1Q5TC82 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
RC3H1Q5TC82 LSM12P1-201ENST00000411836 588 ntBASIC26.95■■□□□ 1.9
RC3H1Q5TC82 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC26.95■■□□□ 1.9
RC3H1Q5TC82 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
RC3H1Q5TC82 AC061975.6-201ENST00000579045 1553 ntBASIC26.95■■□□□ 1.9
RC3H1Q5TC82 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
RC3H1Q5TC82 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RC3H1Q5TC82 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
RC3H1Q5TC82 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC26.94■■□□□ 1.9
RC3H1Q5TC82 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
RC3H1Q5TC82 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
RC3H1Q5TC82 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
RC3H1Q5TC82 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
RC3H1Q5TC82 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC26.94■■□□□ 1.9
RC3H1Q5TC82 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC26.94■■□□□ 1.9
RC3H1Q5TC82 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC26.94■■□□□ 1.9
RC3H1Q5TC82 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.94■■□□□ 1.9
RC3H1Q5TC82 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RC3H1Q5TC82 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RC3H1Q5TC82 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
RC3H1Q5TC82 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC26.93■■□□□ 1.9
RC3H1Q5TC82 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RC3H1Q5TC82 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC26.93■■□□□ 1.9
RC3H1Q5TC82 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
RC3H1Q5TC82 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RC3H1Q5TC82 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC26.93■■□□□ 1.9
RC3H1Q5TC82 AC008403.3-201ENST00000598924 454 ntBASIC26.93■■□□□ 1.9
RC3H1Q5TC82 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC26.93■■□□□ 1.9
RC3H1Q5TC82 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RC3H1Q5TC82 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
RC3H1Q5TC82 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
RC3H1Q5TC82 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RC3H1Q5TC82 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC26.92■■□□□ 1.9
RC3H1Q5TC82 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC26.92■■□□□ 1.9
RC3H1Q5TC82 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC26.92■■□□□ 1.9
RC3H1Q5TC82 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC26.92■■□□□ 1.9
RC3H1Q5TC82 AC008550.1-201ENST00000511500 884 ntBASIC26.92■■□□□ 1.9
RC3H1Q5TC82 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC26.92■■□□□ 1.9
RC3H1Q5TC82 USP36-216ENST00000589424 970 ntTSL 5 BASIC26.92■■□□□ 1.9
RC3H1Q5TC82 AC087742.1-201ENST00000575880 1738 ntBASIC26.92■■□□□ 1.9
RC3H1Q5TC82 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RC3H1Q5TC82 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RC3H1Q5TC82 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RC3H1Q5TC82 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC26.91■■□□□ 1.9
RC3H1Q5TC82 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC26.91■■□□□ 1.9
RC3H1Q5TC82 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.91■■□□□ 1.9
RC3H1Q5TC82 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RC3H1Q5TC82 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
RC3H1Q5TC82 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC26.91■■□□□ 1.9
RC3H1Q5TC82 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC26.91■■□□□ 1.9
RC3H1Q5TC82 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RC3H1Q5TC82 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC26.91■■□□□ 1.9
RC3H1Q5TC82 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC26.91■■□□□ 1.9
RC3H1Q5TC82 UBE2SP1-201ENST00000450587 669 ntBASIC26.91■■□□□ 1.9
RC3H1Q5TC82 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RC3H1Q5TC82 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC26.91■■□□□ 1.9
RC3H1Q5TC82 AC100791.3-201ENST00000617619 330 ntBASIC26.91■■□□□ 1.9
RC3H1Q5TC82 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RC3H1Q5TC82 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RC3H1Q5TC82 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RC3H1Q5TC82 KRT17P1-201ENST00000399211 1546 ntBASIC26.9■■□□□ 1.9
RC3H1Q5TC82 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC26.9■■□□□ 1.9
RC3H1Q5TC82 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
RC3H1Q5TC82 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
RC3H1Q5TC82 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
RC3H1Q5TC82 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC26.9■■□□□ 1.9
RC3H1Q5TC82 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RC3H1Q5TC82 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
RC3H1Q5TC82 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RC3H1Q5TC82 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
RC3H1Q5TC82 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC26.9■■□□□ 1.9
RC3H1Q5TC82 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC26.9■■□□□ 1.9
RC3H1Q5TC82 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC26.9■■□□□ 1.9
RC3H1Q5TC82 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC26.9■■□□□ 1.9
RC3H1Q5TC82 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.9■■□□□ 1.9
RC3H1Q5TC82 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
RC3H1Q5TC82 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RC3H1Q5TC82 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC26.89■■□□□ 1.9
RC3H1Q5TC82 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RC3H1Q5TC82 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
RC3H1Q5TC82 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RC3H1Q5TC82 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC26.89■■□□□ 1.9
RC3H1Q5TC82 NME6-213ENST00000451657 871 ntTSL 2 BASIC26.89■■□□□ 1.9
RC3H1Q5TC82 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC26.89■■□□□ 1.9
RC3H1Q5TC82 FAM21FP-204ENST00000608637 956 ntBASIC26.89■■□□□ 1.9
RC3H1Q5TC82 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC26.89■■□□□ 1.9
RC3H1Q5TC82 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.89■■□□□ 1.89
RC3H1Q5TC82 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
RC3H1Q5TC82 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RC3H1Q5TC82 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
RC3H1Q5TC82 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC26.88■■□□□ 1.89
RC3H1Q5TC82 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC26.88■■□□□ 1.89
RC3H1Q5TC82 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC26.88■■□□□ 1.89
RC3H1Q5TC82 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RC3H1Q5TC82 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms