Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D28Q2M2D7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.38■□□□□ 0.53
TBC1D28Q2M2D7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.38■□□□□ 0.53
TBC1D28Q2M2D7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D28Q2M2D7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.38■□□□□ 0.53
TBC1D28Q2M2D7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TBC1D28Q2M2D7 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.38■□□□□ 0.53
TBC1D28Q2M2D7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.38■□□□□ 0.53
TBC1D28Q2M2D7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.38■□□□□ 0.53
TBC1D28Q2M2D7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D28Q2M2D7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TBC1D28Q2M2D7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D28Q2M2D7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D28Q2M2D7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D28Q2M2D7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D28Q2M2D7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D28Q2M2D7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D28Q2M2D7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D28Q2M2D7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D28Q2M2D7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TBC1D28Q2M2D7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TBC1D28Q2M2D7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TBC1D28Q2M2D7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TBC1D28Q2M2D7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.37■□□□□ 0.53
TBC1D28Q2M2D7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.37■□□□□ 0.53
TBC1D28Q2M2D7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.37■□□□□ 0.53
TBC1D28Q2M2D7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TBC1D28Q2M2D7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.37■□□□□ 0.53
TBC1D28Q2M2D7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TBC1D28Q2M2D7 AC053503.5-201ENST00000601508 636 ntBASIC18.37■□□□□ 0.53
TBC1D28Q2M2D7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TBC1D28Q2M2D7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TBC1D28Q2M2D7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.37■□□□□ 0.53
TBC1D28Q2M2D7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TBC1D28Q2M2D7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.37■□□□□ 0.53
TBC1D28Q2M2D7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.37■□□□□ 0.53
TBC1D28Q2M2D7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TBC1D28Q2M2D7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TBC1D28Q2M2D7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TBC1D28Q2M2D7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TBC1D28Q2M2D7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TBC1D28Q2M2D7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TBC1D28Q2M2D7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TBC1D28Q2M2D7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TBC1D28Q2M2D7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TBC1D28Q2M2D7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.36■□□□□ 0.53
TBC1D28Q2M2D7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TBC1D28Q2M2D7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.36■□□□□ 0.53
TBC1D28Q2M2D7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TBC1D28Q2M2D7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.36■□□□□ 0.53
TBC1D28Q2M2D7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.36■□□□□ 0.53
TBC1D28Q2M2D7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.35■□□□□ 0.53
TBC1D28Q2M2D7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.35■□□□□ 0.53
TBC1D28Q2M2D7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D28Q2M2D7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D28Q2M2D7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D28Q2M2D7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
TBC1D28Q2M2D7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
TBC1D28Q2M2D7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D28Q2M2D7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.35■□□□□ 0.53
TBC1D28Q2M2D7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D28Q2M2D7 EEF1DP3-203ENST00000566025 782 ntBASIC18.35■□□□□ 0.53
TBC1D28Q2M2D7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.35■□□□□ 0.53
TBC1D28Q2M2D7 NTF6G-201ENST00000591094 616 ntBASIC18.35■□□□□ 0.53
TBC1D28Q2M2D7 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.35■□□□□ 0.53
TBC1D28Q2M2D7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TBC1D28Q2M2D7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D28Q2M2D7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D28Q2M2D7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D28Q2M2D7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TBC1D28Q2M2D7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TBC1D28Q2M2D7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D28Q2M2D7 LINC00565-201ENST00000562710 2331 ntBASIC18.34■□□□□ 0.53
TBC1D28Q2M2D7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D28Q2M2D7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D28Q2M2D7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
TBC1D28Q2M2D7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D28Q2M2D7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D28Q2M2D7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D28Q2M2D7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.34■□□□□ 0.53
TBC1D28Q2M2D7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.34■□□□□ 0.53
TBC1D28Q2M2D7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.34■□□□□ 0.53
TBC1D28Q2M2D7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.34■□□□□ 0.53
TBC1D28Q2M2D7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.34■□□□□ 0.53
TBC1D28Q2M2D7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TBC1D28Q2M2D7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D28Q2M2D7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D28Q2M2D7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.34■□□□□ 0.53
TBC1D28Q2M2D7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TBC1D28Q2M2D7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TBC1D28Q2M2D7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
TBC1D28Q2M2D7 AC004854.2-201ENST00000608450 1441 ntBASIC18.33■□□□□ 0.53
TBC1D28Q2M2D7 AC244015.2-201ENST00000616358 1861 ntBASIC18.33■□□□□ 0.53
TBC1D28Q2M2D7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TBC1D28Q2M2D7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TBC1D28Q2M2D7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.33■□□□□ 0.53
TBC1D28Q2M2D7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TBC1D28Q2M2D7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.33■□□□□ 0.53
TBC1D28Q2M2D7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.33■□□□□ 0.53
TBC1D28Q2M2D7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms