Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 ERP1YAR002C-A 660 nt4.76□□□□□ -1.65
UBP3Q01477 SEC22YLR268W 645 nt4.76□□□□□ -1.65
UBP3Q01477 OCA2YNL056W 594 nt4.76□□□□□ -1.65
UBP3Q01477 MSN1YOL116W 1149 nt4.76□□□□□ -1.65 RIP-Chip
UBP3Q01477 YBR051WYBR051W 351 nt4.76□□□□□ -1.65
UBP3Q01477 YPR170CYPR170C 336 nt4.76□□□□□ -1.65
UBP3Q01477 SEC66YBR171W 621 nt4.76□□□□□ -1.65
UBP3Q01477 GPX2YBR244W 489 nt4.76□□□□□ -1.65
UBP3Q01477 HCM1YCR065W 1695 nt4.76□□□□□ -1.65
UBP3Q01477 THR4YCR053W 1545 nt4.76□□□□□ -1.65 RIP-Chip
UBP3Q01477 SLY41YOR307C 1362 nt4.76□□□□□ -1.65
UBP3Q01477 YDR170W-AYDR170W-A 1323 nt4.75□□□□□ -1.65
UBP3Q01477 YNL284C-AYNL284C-A 1323 nt4.75□□□□□ -1.65
UBP3Q01477 snR5snR5 204 nt4.75□□□□□ -1.65
UBP3Q01477 MET32YDR253C 576 nt4.75□□□□□ -1.65
UBP3Q01477 YDR269CYDR269C 324 nt4.75□□□□□ -1.65
UBP3Q01477 PMI40YER003C 1290 nt4.75□□□□□ -1.65
UBP3Q01477 YER079WYER079W 633 nt4.75□□□□□ -1.65
UBP3Q01477 SPR6YER115C 576 nt4.75□□□□□ -1.65
UBP3Q01477 TPM2YIL138C 486 nt4.75□□□□□ -1.65
UBP3Q01477 YIR014WYIR014W 729 nt4.75□□□□□ -1.65
UBP3Q01477 LSO1YJR005C-A 282 nt4.75□□□□□ -1.65
UBP3Q01477 ENV10YLR065C 546 nt4.75□□□□□ -1.65 RIP-Chip
UBP3Q01477 YAR053WYAR053W 297 nt4.75□□□□□ -1.65
UBP3Q01477 FBP1YLR377C 1047 nt4.75□□□□□ -1.65
UBP3Q01477 SWS2YNL081C 432 nt4.75□□□□□ -1.65
UBP3Q01477 YPT53YNL093W 663 nt4.75□□□□□ -1.65
UBP3Q01477 YOR082CYOR082C 342 nt4.75□□□□□ -1.65
UBP3Q01477 PAH1YMR165C 2589 nt4.75□□□□□ -1.65 RIP-Chip
UBP3Q01477 YKL075CYKL075C 1353 nt4.75□□□□□ -1.65
UBP3Q01477 SIN4YNL236W 2925 nt4.75□□□□□ -1.65 RIP-Chip
UBP3Q01477 ERG11YHR007C 1593 nt4.74□□□□□ -1.65
UBP3Q01477 PGS1YCL004W 1566 nt4.74□□□□□ -1.65
UBP3Q01477 NAT1YDL040C 2565 nt4.74□□□□□ -1.65
UBP3Q01477 YOL019WYOL019W 1656 nt4.74□□□□□ -1.65
UBP3Q01477 YDL187CYDL187C 330 nt4.74□□□□□ -1.65
UBP3Q01477 RIP1YEL024W 648 nt4.74□□□□□ -1.65
UBP3Q01477 HUR1YGL168W 333 nt4.74□□□□□ -1.65
UBP3Q01477 YHL034W-AYHL034W-A 462 nt4.74□□□□□ -1.65
UBP3Q01477 YHR125WYHR125W 306 nt4.74□□□□□ -1.65
UBP3Q01477 YIL165CYIL165C 360 nt4.74□□□□□ -1.65
UBP3Q01477 YOR248WYOR248W 303 nt4.74□□□□□ -1.65
UBP3Q01477 YPR136CYPR136C 513 nt4.74□□□□□ -1.65
UBP3Q01477 CUR1YPR158W 759 nt4.74□□□□□ -1.65
UBP3Q01477 LTV1YKL143W 1392 nt4.74□□□□□ -1.65
UBP3Q01477 SEC27YGL137W 2670 nt4.74□□□□□ -1.65 RIP-Chip
UBP3Q01477 TSR1YDL060W 2367 nt4.73□□□□□ -1.65 RIP-Chip
UBP3Q01477 ESA1YOR244W 1338 nt4.73□□□□□ -1.65
UBP3Q01477 BCK2YER167W 2556 nt4.73□□□□□ -1.65
UBP3Q01477 YDL199CYDL199C 2064 nt4.73□□□□□ -1.65
UBP3Q01477 YHR130CYHR130C 336 nt4.73□□□□□ -1.65
UBP3Q01477 RPS4AYJR145C 786 nt4.73□□□□□ -1.65
UBP3Q01477 YLR297WYLR297W 390 nt4.73□□□□□ -1.65
UBP3Q01477 YPL088WYPL088W 1029 nt4.73□□□□□ -1.65 RIP-Chip
UBP3Q01477 SVS1YPL163C 783 nt4.73□□□□□ -1.65
UBP3Q01477 ICY2YPL250C 411 nt4.73□□□□□ -1.65
UBP3Q01477 YPR016W-AYPR016W-A 261 nt4.73□□□□□ -1.65
UBP3Q01477 VID24YBR105C 1089 nt4.73□□□□□ -1.65 RIP-Chip
UBP3Q01477 WHI3YNL197C 1986 nt4.73□□□□□ -1.65
UBP3Q01477 MSM1YGR171C 1728 nt4.72□□□□□ -1.65 RIP-Chip
UBP3Q01477 NUP85YJR042W 2235 nt4.72□□□□□ -1.65
UBP3Q01477 VMA8YEL051W 771 nt4.72□□□□□ -1.65 RIP-Chip
UBP3Q01477 QCR10YHR001W-A 234 nt4.72□□□□□ -1.65
UBP3Q01477 ENT3YJR125C 1227 nt4.72□□□□□ -1.65 RIP-Chip
UBP3Q01477 YET1YKL065C 621 nt4.72□□□□□ -1.65
UBP3Q01477 CDC42YLR229C 576 nt4.72□□□□□ -1.65
UBP3Q01477 YNL235CYNL235C 432 nt4.72□□□□□ -1.65
UBP3Q01477 PHO80YOL001W 882 nt4.72□□□□□ -1.65
UBP3Q01477 MRPL40YPL173W 894 nt4.72□□□□□ -1.65
UBP3Q01477 FRM2YCL026C-A 582 nt4.72□□□□□ -1.65
UBP3Q01477 RTC1YOL138C 4026 nt4.72□□□□□ -1.65
UBP3Q01477 SUC2YIL162W 1599 nt4.72□□□□□ -1.65
UBP3Q01477 YCT1YLL055W 1596 nt4.71□□□□□ -1.66 RIP-Chip
UBP3Q01477 YHR050W-AYHR050W-A 171 nt4.71□□□□□ -1.66
UBP3Q01477 YIR036W-AYIR036W-A 402 nt4.71□□□□□ -1.66
UBP3Q01477 NGL1YOL042W 1092 nt4.71□□□□□ -1.66
UBP3Q01477 RPS19AYOL121C 435 nt4.71□□□□□ -1.66
UBP3Q01477 YPL035CYPL035C 348 nt4.71□□□□□ -1.66
UBP3Q01477 YPL119C-AYPL119C-A 264 nt4.71□□□□□ -1.66
UBP3Q01477 YRO2YBR054W 1035 nt4.71□□□□□ -1.66
UBP3Q01477 snR17asnR17a 333 nt4.71□□□□□ -1.66
UBP3Q01477 YPL185WYPL185W 396 nt4.71□□□□□ -1.66
UBP3Q01477 SPN1YPR133C 1233 nt4.71□□□□□ -1.66
UBP3Q01477 snR24snR24 89 nt4.71□□□□□ -1.66
UBP3Q01477 YMR221CYMR221C 1515 nt4.71□□□□□ -1.66
UBP3Q01477 RTT109YLL002W 1311 nt4.71□□□□□ -1.66
UBP3Q01477 YMR046CYMR046C 1323 nt4.71□□□□□ -1.66
UBP3Q01477 HUL5YGL141W 2733 nt4.7□□□□□ -1.66
UBP3Q01477 YER087C-AYER087C-A 552 nt4.7□□□□□ -1.66
UBP3Q01477 YER119C-AYER119C-A 372 nt4.7□□□□□ -1.66
UBP3Q01477 SDP1YIL113W 630 nt4.7□□□□□ -1.66
UBP3Q01477 RPL15BYMR121C 615 nt4.7□□□□□ -1.66
UBP3Q01477 YPL278CYPL278C 303 nt4.7□□□□□ -1.66
UBP3Q01477 REI1YBR267W 1182 nt4.7□□□□□ -1.66
UBP3Q01477 PRM15YMR278W 1869 nt4.7□□□□□ -1.66 RIP-Chip
UBP3Q01477 MNN1YER001W 2289 nt4.7□□□□□ -1.66
UBP3Q01477 YML096WYML096W 1578 nt4.7□□□□□ -1.66 RIP-Chip
UBP3Q01477 PKP2YGL059W 1476 nt4.69□□□□□ -1.66
UBP3Q01477 YCR064CYCR064C 411 nt4.69□□□□□ -1.66
UBP3Q01477 tK(CUU)CtK(CUU)C 73 nt4.69□□□□□ -1.66
Retrieved 100 of 7,029 protein–RNA pairs in 48.7 ms