Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A1P61619 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A1P61619 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
SEC61A1P61619 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.4■□□□□ 0.54
SEC61A1P61619 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SEC61A1P61619 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SEC61A1P61619 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.39■□□□□ 0.53
SEC61A1P61619 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
SEC61A1P61619 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SEC61A1P61619 AC004687.1-201ENST00000579003 1625 ntBASIC18.39■□□□□ 0.53
SEC61A1P61619 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.39■□□□□ 0.53
SEC61A1P61619 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.39■□□□□ 0.53
SEC61A1P61619 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SEC61A1P61619 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SEC61A1P61619 OR2I1P-207ENST00000453522 948 ntBASIC18.39■□□□□ 0.53
SEC61A1P61619 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.39■□□□□ 0.53
SEC61A1P61619 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.39■□□□□ 0.53
SEC61A1P61619 AC087742.1-201ENST00000575880 1738 ntBASIC18.39■□□□□ 0.53
SEC61A1P61619 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SEC61A1P61619 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SEC61A1P61619 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SEC61A1P61619 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.39■□□□□ 0.53
SEC61A1P61619 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SEC61A1P61619 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SEC61A1P61619 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SEC61A1P61619 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.38■□□□□ 0.53
SEC61A1P61619 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SEC61A1P61619 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SEC61A1P61619 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SEC61A1P61619 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.38■□□□□ 0.53
SEC61A1P61619 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.38■□□□□ 0.53
SEC61A1P61619 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.38■□□□□ 0.53
SEC61A1P61619 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
SEC61A1P61619 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SEC61A1P61619 TSPY26P-201ENST00000476365 1326 ntBASIC18.38■□□□□ 0.53
SEC61A1P61619 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SEC61A1P61619 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SEC61A1P61619 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SEC61A1P61619 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SEC61A1P61619 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.38■□□□□ 0.53
SEC61A1P61619 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEC61A1P61619 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEC61A1P61619 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEC61A1P61619 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SEC61A1P61619 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEC61A1P61619 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEC61A1P61619 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEC61A1P61619 IRS3P-201ENST00000223076 1006 ntBASIC18.37■□□□□ 0.53
SEC61A1P61619 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.37■□□□□ 0.53
SEC61A1P61619 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEC61A1P61619 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.37■□□□□ 0.53
SEC61A1P61619 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
SEC61A1P61619 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SEC61A1P61619 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEC61A1P61619 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEC61A1P61619 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEC61A1P61619 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEC61A1P61619 AL391422.3-201ENST00000603791 2761 ntBASIC18.36■□□□□ 0.53
SEC61A1P61619 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SEC61A1P61619 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SEC61A1P61619 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SEC61A1P61619 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SEC61A1P61619 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SEC61A1P61619 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SEC61A1P61619 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SEC61A1P61619 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.36■□□□□ 0.53
SEC61A1P61619 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SEC61A1P61619 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SEC61A1P61619 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SEC61A1P61619 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.36■□□□□ 0.53
SEC61A1P61619 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SEC61A1P61619 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SEC61A1P61619 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SEC61A1P61619 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SEC61A1P61619 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SEC61A1P61619 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SEC61A1P61619 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
SEC61A1P61619 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SEC61A1P61619 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.35■□□□□ 0.53
SEC61A1P61619 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SEC61A1P61619 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.35■□□□□ 0.53
SEC61A1P61619 AC026271.2-201ENST00000428091 497 ntBASIC18.35■□□□□ 0.53
SEC61A1P61619 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SEC61A1P61619 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
SEC61A1P61619 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SEC61A1P61619 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.35■□□□□ 0.53
SEC61A1P61619 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.35■□□□□ 0.53
SEC61A1P61619 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SEC61A1P61619 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
SEC61A1P61619 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SEC61A1P61619 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SEC61A1P61619 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.34■□□□□ 0.53
SEC61A1P61619 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SEC61A1P61619 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SEC61A1P61619 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SEC61A1P61619 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.34■□□□□ 0.53
SEC61A1P61619 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SEC61A1P61619 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SEC61A1P61619 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SEC61A1P61619 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms