Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.34■□□□□ 0.69
CLDN20P56880 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN20P56880 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN20P56880 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN20P56880 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CLDN20P56880 AC009237.3-201ENST00000393279 1427 ntBASIC19.34■□□□□ 0.69
CLDN20P56880 AC005224.4-201ENST00000583262 1652 ntBASIC19.33■□□□□ 0.69
CLDN20P56880 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CLDN20P56880 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN20P56880 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN20P56880 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN20P56880 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN20P56880 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN20P56880 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.33■□□□□ 0.69
CLDN20P56880 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN20P56880 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CLDN20P56880 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN20P56880 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.33■□□□□ 0.68
CLDN20P56880 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CLDN20P56880 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN20P56880 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.33■□□□□ 0.68
CLDN20P56880 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN20P56880 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.33■□□□□ 0.68
CLDN20P56880 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.33■□□□□ 0.68
CLDN20P56880 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.33■□□□□ 0.68
CLDN20P56880 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN20P56880 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN20P56880 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN20P56880 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.33■□□□□ 0.68
CLDN20P56880 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN20P56880 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN20P56880 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN20P56880 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN20P56880 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CLDN20P56880 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN20P56880 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CLDN20P56880 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.32■□□□□ 0.68
CLDN20P56880 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN20P56880 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN20P56880 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN20P56880 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.32■□□□□ 0.68
CLDN20P56880 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.32■□□□□ 0.68
CLDN20P56880 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.32■□□□□ 0.68
CLDN20P56880 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.32■□□□□ 0.68
CLDN20P56880 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.32■□□□□ 0.68
CLDN20P56880 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN20P56880 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.32■□□□□ 0.68
CLDN20P56880 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN20P56880 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN20P56880 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN20P56880 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CLDN20P56880 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CLDN20P56880 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN20P56880 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN20P56880 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN20P56880 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN20P56880 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN20P56880 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CLDN20P56880 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN20P56880 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.31■□□□□ 0.68
CLDN20P56880 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN20P56880 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN20P56880 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
CLDN20P56880 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.31■□□□□ 0.68
CLDN20P56880 KRT18P5-201ENST00000436075 1291 ntBASIC19.31■□□□□ 0.68
CLDN20P56880 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.31■□□□□ 0.68
CLDN20P56880 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.31■□□□□ 0.68
CLDN20P56880 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN20P56880 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN20P56880 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.31■□□□□ 0.68
CLDN20P56880 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CLDN20P56880 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CLDN20P56880 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN20P56880 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN20P56880 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN20P56880 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN20P56880 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN20P56880 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.3■□□□□ 0.68
CLDN20P56880 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN20P56880 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN20P56880 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN20P56880 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN20P56880 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN20P56880 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
CLDN20P56880 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN20P56880 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN20P56880 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CLDN20P56880 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.3■□□□□ 0.68
CLDN20P56880 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.3■□□□□ 0.68
CLDN20P56880 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN20P56880 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN20P56880 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CLDN20P56880 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN20P56880 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN20P56880 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CLDN20P56880 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN20P56880 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.3■□□□□ 0.68
CLDN20P56880 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN20P56880 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN20P56880 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms