Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SUMO3P55854 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SUMO3P55854 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.2■□□□□ 0.66
SUMO3P55854 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.2■□□□□ 0.66
SUMO3P55854 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SUMO3P55854 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.2■□□□□ 0.66
SUMO3P55854 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.2■□□□□ 0.66
SUMO3P55854 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.19■□□□□ 0.66
SUMO3P55854 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SUMO3P55854 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SUMO3P55854 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SUMO3P55854 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SUMO3P55854 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SUMO3P55854 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SUMO3P55854 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.19■□□□□ 0.66
SUMO3P55854 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.19■□□□□ 0.66
SUMO3P55854 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SUMO3P55854 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.19■□□□□ 0.66
SUMO3P55854 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.19■□□□□ 0.66
SUMO3P55854 AC087623.3-201ENST00000607047 1098 ntBASIC19.19■□□□□ 0.66
SUMO3P55854 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SUMO3P55854 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SUMO3P55854 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SUMO3P55854 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.19■□□□□ 0.66
SUMO3P55854 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.19■□□□□ 0.66
SUMO3P55854 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SUMO3P55854 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SUMO3P55854 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SUMO3P55854 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.18■□□□□ 0.66
SUMO3P55854 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SUMO3P55854 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SUMO3P55854 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SUMO3P55854 POU5F1P4-201ENST00000413175 1085 ntBASIC19.18■□□□□ 0.66
SUMO3P55854 AC010141.2-201ENST00000452426 721 ntBASIC19.18■□□□□ 0.66
SUMO3P55854 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.18■□□□□ 0.66
SUMO3P55854 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SUMO3P55854 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.18■□□□□ 0.66
SUMO3P55854 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.18■□□□□ 0.66
SUMO3P55854 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.18■□□□□ 0.66
SUMO3P55854 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.18■□□□□ 0.66
SUMO3P55854 AC008175.2-201ENST00000612840 297 ntBASIC19.18■□□□□ 0.66
SUMO3P55854 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SUMO3P55854 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SUMO3P55854 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SUMO3P55854 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SUMO3P55854 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SUMO3P55854 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SUMO3P55854 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.17■□□□□ 0.66
SUMO3P55854 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.17■□□□□ 0.66
SUMO3P55854 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.17■□□□□ 0.66
SUMO3P55854 Z98882.1-201ENST00000622160 2253 ntBASIC19.17■□□□□ 0.66
SUMO3P55854 AP004607.4-201ENST00000530158 1459 ntBASIC19.17■□□□□ 0.66
SUMO3P55854 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SUMO3P55854 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SUMO3P55854 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SUMO3P55854 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SUMO3P55854 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SUMO3P55854 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.17■□□□□ 0.66
SUMO3P55854 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SUMO3P55854 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.17■□□□□ 0.66
SUMO3P55854 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SUMO3P55854 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.17■□□□□ 0.66
SUMO3P55854 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SUMO3P55854 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SUMO3P55854 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SUMO3P55854 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SUMO3P55854 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SUMO3P55854 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SUMO3P55854 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SUMO3P55854 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SUMO3P55854 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SUMO3P55854 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SUMO3P55854 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SUMO3P55854 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SUMO3P55854 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.16■□□□□ 0.66
SUMO3P55854 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SUMO3P55854 KRT19P1-201ENST00000405746 1186 ntBASIC19.16■□□□□ 0.66
SUMO3P55854 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.16■□□□□ 0.66
SUMO3P55854 MIR5787-201ENST00000611784 55 ntBASIC19.16■□□□□ 0.66
SUMO3P55854 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SUMO3P55854 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.16■□□□□ 0.66
SUMO3P55854 AC004854.2-201ENST00000608450 1441 ntBASIC19.16■□□□□ 0.66
SUMO3P55854 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SUMO3P55854 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SUMO3P55854 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SUMO3P55854 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SUMO3P55854 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SUMO3P55854 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.15■□□□□ 0.66
SUMO3P55854 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SUMO3P55854 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.15■□□□□ 0.66
SUMO3P55854 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SUMO3P55854 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.15■□□□□ 0.66
SUMO3P55854 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.15■□□□□ 0.66
SUMO3P55854 AC104187.1-201ENST00000607510 612 ntBASIC19.15■□□□□ 0.66
SUMO3P55854 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.15■□□□□ 0.66
SUMO3P55854 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SUMO3P55854 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SUMO3P55854 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SUMO3P55854 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SUMO3P55854 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms