Protein–RNA interactions for Protein: P53836

CAF120, CCR4-NOT transcriptional complex subunit CAF120, yeastyeast

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF120P53836 YBR085C-AYBR085C-A 258 nt5.36□□□□□ -1.55
CAF120P53836 snR36snR36 182 nt5.36□□□□□ -1.55
CAF120P53836 VPS9YML097C 1356 nt5.36□□□□□ -1.55
CAF120P53836 MAL33YBR297W 1407 nt5.36□□□□□ -1.55
CAF120P53836 STE7YDL159W 1548 nt5.36□□□□□ -1.55
CAF120P53836 NGL3YML118W 1518 nt5.36□□□□□ -1.55
CAF120P53836 TDA3YHR009C 1572 nt5.36□□□□□ -1.55
CAF120P53836 ASH1YKL185W 1767 nt5.36□□□□□ -1.55
CAF120P53836 RET1YOR207C 3450 nt5.36□□□□□ -1.55
CAF120P53836 PHO8YDR481C 1701 nt5.35□□□□□ -1.55
CAF120P53836 ARP9YMR033W 1404 nt5.35□□□□□ -1.55
CAF120P53836 RPB9YGL070C 369 nt5.35□□□□□ -1.55
CAF120P53836 ERV1YGR029W 570 nt5.35□□□□□ -1.55
CAF120P53836 YHL034W-AYHL034W-A 462 nt5.35□□□□□ -1.55
CAF120P53836 YIL171W-AYIL171W-A 453 nt5.35□□□□□ -1.55
CAF120P53836 YJL220WYJL220W 453 nt5.35□□□□□ -1.55
CAF120P53836 EMC2YJR088C 879 nt5.35□□□□□ -1.55
CAF120P53836 YOR011W-AYOR011W-A 207 nt5.35□□□□□ -1.55
CAF120P53836 CET1YPL228W 1650 nt5.34□□□□□ -1.55
CAF120P53836 DPH2YKL191W 1605 nt5.34□□□□□ -1.55
CAF120P53836 PAC1YOR269W 1485 nt5.34□□□□□ -1.55
CAF120P53836 YCL068CYCL068C 783 nt5.34□□□□□ -1.55
CAF120P53836 YCR013CYCR013C 648 nt5.34□□□□□ -1.55
CAF120P53836 YDL009CYDL009C 324 nt5.34□□□□□ -1.55
CAF120P53836 YDL094CYDL094C 510 nt5.34□□□□□ -1.55
CAF120P53836 COX18YGR062C 951 nt5.34□□□□□ -1.55
CAF120P53836 PDX3YBR035C 687 nt5.34□□□□□ -1.55
CAF120P53836 YPR098CYPR098C 486 nt5.34□□□□□ -1.55
CAF120P53836 CHA4YLR098C 1947 nt5.34□□□□□ -1.55
CAF120P53836 TRK2YKR050W 2670 nt5.34□□□□□ -1.55
CAF120P53836 LAS21YJL062W 2493 nt5.34□□□□□ -1.56
CAF120P53836 RRN11YML043C 1524 nt5.33□□□□□ -1.56
CAF120P53836 PRM7YDL039C 2097 nt5.33□□□□□ -1.56
CAF120P53836 POL31YJR006W 1464 nt5.33□□□□□ -1.56
CAF120P53836 SUM1YDR310C 3189 nt5.33□□□□□ -1.56
CAF120P53836 SAP155YFR040W 3009 nt5.33□□□□□ -1.56
CAF120P53836 RRN3YKL125W 1884 nt5.33□□□□□ -1.56
CAF120P53836 KRE2YDR483W 1329 nt5.33□□□□□ -1.56
CAF120P53836 TUB3YML124C 1338 nt5.33□□□□□ -1.56
CAF120P53836 BNA6YFR047C 888 nt5.33□□□□□ -1.56
CAF120P53836 PGA3YML125C 939 nt5.33□□□□□ -1.56
CAF120P53836 MOT2YER068W 1764 nt5.33□□□□□ -1.56
CAF120P53836 GSY2YLR258W 2118 nt5.33□□□□□ -1.56
CAF120P53836 RAD53YPL153C 2466 nt5.33□□□□□ -1.56
CAF120P53836 YNL095CYNL095C 1929 nt5.33□□□□□ -1.56
CAF120P53836 RIM101YHL027W 1878 nt5.32□□□□□ -1.56
CAF120P53836 SSF2YDR312W 1362 nt5.32□□□□□ -1.56
CAF120P53836 TEF1YPR080W 1377 nt5.32□□□□□ -1.56
CAF120P53836 TEF2YBR118W 1377 nt5.32□□□□□ -1.56
CAF120P53836 AFT1YGL071W 2073 nt5.32□□□□□ -1.56
CAF120P53836 YGR035W-AYGR035W-A 222 nt5.32□□□□□ -1.56
CAF120P53836 PXR1YGR280C 816 nt5.32□□□□□ -1.56
CAF120P53836 UTP11YKL099C 753 nt5.32□□□□□ -1.56
CAF120P53836 YKL223WYKL223W 333 nt5.32□□□□□ -1.56
CAF120P53836 YML031C-AYML031C-A 336 nt5.32□□□□□ -1.56
CAF120P53836 HOR7YMR251W-A 180 nt5.32□□□□□ -1.56
CAF120P53836 INA17YPL099C 549 nt5.32□□□□□ -1.56
CAF120P53836 snR32snR32 188 nt5.32□□□□□ -1.56
CAF120P53836 GDT1YBR187W 843 nt5.32□□□□□ -1.56
CAF120P53836 PEP7YDR323C 1548 nt5.32□□□□□ -1.56
CAF120P53836 THI21YPL258C 1656 nt5.31□□□□□ -1.56
CAF120P53836 RGP1YDR137W 1992 nt5.31□□□□□ -1.56
CAF120P53836 APL6YGR261C 2430 nt5.31□□□□□ -1.56
CAF120P53836 API2YDR525W 330 nt5.31□□□□□ -1.56
CAF120P53836 MIC26YGR235C 702 nt5.31□□□□□ -1.56
CAF120P53836 SHE2YKL130C 741 nt5.31□□□□□ -1.56
CAF120P53836 GTT2YLL060C 702 nt5.31□□□□□ -1.56
CAF120P53836 POP3YNL282W 588 nt5.31□□□□□ -1.56
CAF120P53836 DUR1,2YBR208C 5508 nt5.31□□□□□ -1.56
CAF120P53836 CAB3YKL088W 1716 nt5.31□□□□□ -1.56
CAF120P53836 SRP1YNL189W 1629 nt5.3□□□□□ -1.56
CAF120P53836 ACS2YLR153C 2052 nt5.3□□□□□ -1.56
CAF120P53836 ERD2YBL040C 660 nt5.3□□□□□ -1.56
CAF120P53836 RPS19AYOL121C 435 nt5.3□□□□□ -1.56
CAF120P53836 TIM18YOR297C 579 nt5.3□□□□□ -1.56
CAF120P53836 BUD14YAR014C 2130 nt5.3□□□□□ -1.56
CAF120P53836 OCT1YKL134C 2319 nt5.3□□□□□ -1.56
CAF120P53836 TUB2YFL037W 1374 nt5.29□□□□□ -1.56
CAF120P53836 SHE10YGL228W 1734 nt5.29□□□□□ -1.56
CAF120P53836 PWP1YLR196W 1731 nt5.29□□□□□ -1.56
CAF120P53836 BUD28YLR062C 378 nt5.29□□□□□ -1.56
CAF120P53836 YLR346CYLR346C 306 nt5.29□□□□□ -1.56
CAF120P53836 YBR032WYBR032W 303 nt5.29□□□□□ -1.56
CAF120P53836 SNT2YGL131C 4212 nt5.28□□□□□ -1.56
CAF120P53836 ESF1YDR365C 1887 nt5.28□□□□□ -1.56
CAF120P53836 TDH3YGR192C 999 nt5.28□□□□□ -1.56
CAF120P53836 ICY1YMR195W 384 nt5.28□□□□□ -1.56
CAF120P53836 YBR090CYBR090C 369 nt5.28□□□□□ -1.56
CAF120P53836 snR24snR24 89 nt5.28□□□□□ -1.56
CAF120P53836 DBP3YGL078C 1572 nt5.28□□□□□ -1.56
CAF120P53836 YML096WYML096W 1578 nt5.28□□□□□ -1.56
CAF120P53836 SNF3YDL194W 2655 nt5.28□□□□□ -1.56
CAF120P53836 PAL1YDR348C 1500 nt5.28□□□□□ -1.56
CAF120P53836 DBF4YDR052C 2115 nt5.27□□□□□ -1.57
CAF120P53836 AVT7YIL088C 1473 nt5.27□□□□□ -1.57
CAF120P53836 KRS1YDR037W 1776 nt5.27□□□□□ -1.57
CAF120P53836 BUD7YOR299W 2241 nt5.27□□□□□ -1.57
CAF120P53836 SEC53YFL045C 765 nt5.27□□□□□ -1.57
CAF120P53836 YFL063WYFL063W 456 nt5.27□□□□□ -1.57
CAF120P53836 YJR128WYJR128W 360 nt5.27□□□□□ -1.57
Retrieved 100 of 7,029 protein–RNA pairs in 17.1 ms