Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLCNKAP51800 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CLCNKAP51800 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLCNKAP51800 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
CLCNKAP51800 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCNKAP51800 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLCNKAP51800 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLCNKAP51800 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCNKAP51800 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCNKAP51800 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCNKAP51800 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLCNKAP51800 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLCNKAP51800 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCNKAP51800 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.76■□□□□ 0.91
CLCNKAP51800 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.76■□□□□ 0.91
CLCNKAP51800 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.76■□□□□ 0.91
CLCNKAP51800 SLC7A5P1-201ENST00000568957 537 ntBASIC20.76■□□□□ 0.91
CLCNKAP51800 AC080038.1-201ENST00000611274 1154 ntBASIC20.76■□□□□ 0.91
CLCNKAP51800 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCNKAP51800 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCNKAP51800 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCNKAP51800 AC010542.4-201ENST00000563151 1910 ntBASIC20.76■□□□□ 0.91
CLCNKAP51800 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.75■□□□□ 0.91
CLCNKAP51800 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLCNKAP51800 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.75■□□□□ 0.91
CLCNKAP51800 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.75■□□□□ 0.91
CLCNKAP51800 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CLCNKAP51800 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.75■□□□□ 0.91
CLCNKAP51800 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.75■□□□□ 0.91
CLCNKAP51800 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCNKAP51800 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCNKAP51800 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCNKAP51800 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.75■□□□□ 0.91
CLCNKAP51800 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CLCNKAP51800 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLCNKAP51800 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCNKAP51800 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCNKAP51800 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.74■□□□□ 0.91
CLCNKAP51800 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.74■□□□□ 0.91
CLCNKAP51800 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.74■□□□□ 0.91
CLCNKAP51800 AC090192.1-201ENST00000517740 490 ntBASIC20.74■□□□□ 0.91
CLCNKAP51800 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.74■□□□□ 0.91
CLCNKAP51800 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.74■□□□□ 0.91
CLCNKAP51800 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCNKAP51800 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCNKAP51800 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCNKAP51800 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.73■□□□□ 0.91
CLCNKAP51800 EP400NL-214ENST00000641289 2402 ntBASIC20.73■□□□□ 0.91
CLCNKAP51800 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCNKAP51800 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.73■□□□□ 0.91
CLCNKAP51800 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLCNKAP51800 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCNKAP51800 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCNKAP51800 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLCNKAP51800 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.73■□□□□ 0.91
CLCNKAP51800 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLCNKAP51800 UBE2DNL-204ENST00000602536 740 ntBASIC20.73■□□□□ 0.91
CLCNKAP51800 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CLCNKAP51800 AC011767.1-201ENST00000617410 1153 ntBASIC20.73■□□□□ 0.91
CLCNKAP51800 MYCNOS-205ENST00000641950 531 ntBASIC20.73■□□□□ 0.91
CLCNKAP51800 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCNKAP51800 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.73■□□□□ 0.91
CLCNKAP51800 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLCNKAP51800 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLCNKAP51800 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCNKAP51800 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CLCNKAP51800 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLCNKAP51800 C11orf96-202ENST00000528572 1834 ntBASIC20.72■□□□□ 0.91
CLCNKAP51800 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCNKAP51800 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.72■□□□□ 0.91
CLCNKAP51800 RAP2CP1-201ENST00000605103 478 ntBASIC20.72■□□□□ 0.91
CLCNKAP51800 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCNKAP51800 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCNKAP51800 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLCNKAP51800 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCNKAP51800 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCNKAP51800 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCNKAP51800 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.71■□□□□ 0.91
CLCNKAP51800 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCNKAP51800 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCNKAP51800 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCNKAP51800 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.71■□□□□ 0.91
CLCNKAP51800 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCNKAP51800 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CLCNKAP51800 POU5F1P4-201ENST00000413175 1085 ntBASIC20.71■□□□□ 0.91
CLCNKAP51800 CDCA4P2-201ENST00000441182 718 ntBASIC20.71■□□□□ 0.91
CLCNKAP51800 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.71■□□□□ 0.91
CLCNKAP51800 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.71■□□□□ 0.91
CLCNKAP51800 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CLCNKAP51800 MFSD11-216ENST00000590393 1141 ntBASIC20.71■□□□□ 0.91
CLCNKAP51800 AC008175.2-201ENST00000612840 297 ntBASIC20.71■□□□□ 0.91
CLCNKAP51800 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.71■□□□□ 0.91
CLCNKAP51800 AC073111.5-205ENST00000641717 521 ntBASIC20.71■□□□□ 0.91
CLCNKAP51800 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCNKAP51800 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
CLCNKAP51800 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
CLCNKAP51800 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLCNKAP51800 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CLCNKAP51800 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CLCNKAP51800 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms