Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.39■□□□□ 0.85
CLCN2P51788 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCN2P51788 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.39■□□□□ 0.85
CLCN2P51788 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.39■□□□□ 0.85
CLCN2P51788 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.39■□□□□ 0.85
CLCN2P51788 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLCN2P51788 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
CLCN2P51788 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
CLCN2P51788 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCN2P51788 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.38■□□□□ 0.85
CLCN2P51788 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCN2P51788 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLCN2P51788 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.38■□□□□ 0.85
CLCN2P51788 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.38■□□□□ 0.85
CLCN2P51788 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.38■□□□□ 0.85
CLCN2P51788 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCN2P51788 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CLCN2P51788 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.38■□□□□ 0.85
CLCN2P51788 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CLCN2P51788 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CLCN2P51788 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.38■□□□□ 0.85
CLCN2P51788 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CLCN2P51788 AC087239.1-201ENST00000622671 572 ntBASIC20.38■□□□□ 0.85
CLCN2P51788 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CLCN2P51788 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
CLCN2P51788 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.38■□□□□ 0.85
CLCN2P51788 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLCN2P51788 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.38■□□□□ 0.85
CLCN2P51788 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.38■□□□□ 0.85
CLCN2P51788 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.37■□□□□ 0.85
CLCN2P51788 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN2P51788 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN2P51788 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CLCN2P51788 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN2P51788 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
CLCN2P51788 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
CLCN2P51788 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.37■□□□□ 0.85
CLCN2P51788 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.37■□□□□ 0.85
CLCN2P51788 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN2P51788 MIR572-201ENST00000384983 95 ntBASIC20.37■□□□□ 0.85
CLCN2P51788 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN2P51788 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.37■□□□□ 0.85
CLCN2P51788 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.37■□□□□ 0.85
CLCN2P51788 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
CLCN2P51788 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN2P51788 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.37■□□□□ 0.85
CLCN2P51788 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.37■□□□□ 0.85
CLCN2P51788 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN2P51788 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.37■□□□□ 0.85
CLCN2P51788 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.37■□□□□ 0.85
CLCN2P51788 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN2P51788 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN2P51788 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN2P51788 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CLCN2P51788 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CLCN2P51788 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN2P51788 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.36■□□□□ 0.85
CLCN2P51788 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CLCN2P51788 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN2P51788 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN2P51788 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN2P51788 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CLCN2P51788 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CLCN2P51788 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN2P51788 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN2P51788 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN2P51788 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.35■□□□□ 0.85
CLCN2P51788 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN2P51788 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN2P51788 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN2P51788 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.35■□□□□ 0.85
CLCN2P51788 AL031602.1-201ENST00000633169 911 ntBASIC20.35■□□□□ 0.85
CLCN2P51788 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.35■□□□□ 0.85
CLCN2P51788 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN2P51788 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN2P51788 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN2P51788 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
CLCN2P51788 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN2P51788 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN2P51788 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.34■□□□□ 0.85
CLCN2P51788 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN2P51788 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.34■□□□□ 0.85
CLCN2P51788 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN2P51788 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN2P51788 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN2P51788 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN2P51788 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN2P51788 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CLCN2P51788 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN2P51788 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN2P51788 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CLCN2P51788 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.34■□□□□ 0.85
CLCN2P51788 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CLCN2P51788 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLCN2P51788 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.33■□□□□ 0.85
CLCN2P51788 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.33■□□□□ 0.85
CLCN2P51788 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLCN2P51788 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.33■□□□□ 0.85
CLCN2P51788 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CLCN2P51788 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms