Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 RARRES2P2-201ENST00000394842 485 ntBASIC16.65■□□□□ 0.26
CDC34P49427 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC34P49427 AC079089.2-201ENST00000531211 1277 ntBASIC16.65■□□□□ 0.26
CDC34P49427 MIR6722-201ENST00000617286 78 ntBASIC16.65■□□□□ 0.26
CDC34P49427 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CDC34P49427 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC34P49427 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CDC34P49427 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC34P49427 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC34P49427 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC34P49427 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDC34P49427 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC34P49427 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC34P49427 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC34P49427 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC34P49427 OR7E47P-201ENST00000546390 1422 ntBASIC16.64■□□□□ 0.25
CDC34P49427 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDC34P49427 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDC34P49427 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC34P49427 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.64■□□□□ 0.25
CDC34P49427 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CDC34P49427 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.64■□□□□ 0.25
CDC34P49427 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC34P49427 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDC34P49427 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.64■□□□□ 0.25
CDC34P49427 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.64■□□□□ 0.25
CDC34P49427 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDC34P49427 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC34P49427 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.64■□□□□ 0.25
CDC34P49427 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.64■□□□□ 0.25
CDC34P49427 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.64■□□□□ 0.25
CDC34P49427 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC34P49427 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC34P49427 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC34P49427 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.64■□□□□ 0.25
CDC34P49427 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CDC34P49427 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CDC34P49427 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDC34P49427 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CDC34P49427 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDC34P49427 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC16.63■□□□□ 0.25
CDC34P49427 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDC34P49427 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.63■□□□□ 0.25
CDC34P49427 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDC34P49427 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.63■□□□□ 0.25
CDC34P49427 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.63■□□□□ 0.25
CDC34P49427 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDC34P49427 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CDC34P49427 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDC34P49427 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDC34P49427 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDC34P49427 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.62■□□□□ 0.25
CDC34P49427 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDC34P49427 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CDC34P49427 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.62■□□□□ 0.25
CDC34P49427 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDC34P49427 PVT1_1.1-201ENST00000615125 194 ntBASIC16.62■□□□□ 0.25
CDC34P49427 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDC34P49427 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.62■□□□□ 0.25
CDC34P49427 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CDC34P49427 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDC34P49427 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CDC34P49427 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDC34P49427 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC34P49427 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC34P49427 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC34P49427 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC34P49427 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.61■□□□□ 0.25
CDC34P49427 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
CDC34P49427 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CDC34P49427 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDC34P49427 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.61■□□□□ 0.25
CDC34P49427 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
CDC34P49427 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC34P49427 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.61■□□□□ 0.25
CDC34P49427 AP005212.1-201ENST00000581547 1997 ntBASIC16.61■□□□□ 0.25
CDC34P49427 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.61■□□□□ 0.25
CDC34P49427 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CDC34P49427 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CDC34P49427 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CDC34P49427 BEX3-202ENST00000372634 753 ntTSL 2 BASIC16.61■□□□□ 0.25
CDC34P49427 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC16.61■□□□□ 0.25
CDC34P49427 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC16.61■□□□□ 0.25
CDC34P49427 MBP-237ENST00000579129 1052 ntTSL 5 BASIC16.61■□□□□ 0.25
CDC34P49427 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC34P49427 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CDC34P49427 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CDC34P49427 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.61■□□□□ 0.25
CDC34P49427 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC34P49427 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC34P49427 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC34P49427 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CDC34P49427 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDC34P49427 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC34P49427 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC34P49427 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.6■□□□□ 0.25
CDC34P49427 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CDC34P49427 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC34P49427 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC34P49427 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms