Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.09■□□□□ 0.97
RXRGP48443 KRT18P20-201ENST00000548986 1279 ntBASIC21.09■□□□□ 0.97
RXRGP48443 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.09■□□□□ 0.97
RXRGP48443 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.09■□□□□ 0.97
RXRGP48443 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RXRGP48443 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RXRGP48443 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.09■□□□□ 0.97
RXRGP48443 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.09■□□□□ 0.97
RXRGP48443 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RXRGP48443 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RXRGP48443 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
RXRGP48443 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RXRGP48443 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RXRGP48443 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RXRGP48443 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.08■□□□□ 0.97
RXRGP48443 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RXRGP48443 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.08■□□□□ 0.97
RXRGP48443 SLC7A5P2-201ENST00000553010 536 ntBASIC21.08■□□□□ 0.97
RXRGP48443 AC138907.5-202ENST00000569484 235 ntBASIC21.08■□□□□ 0.97
RXRGP48443 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RXRGP48443 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.08■□□□□ 0.97
RXRGP48443 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RXRGP48443 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
RXRGP48443 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.08■□□□□ 0.96
RXRGP48443 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RXRGP48443 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.07■□□□□ 0.96
RXRGP48443 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RXRGP48443 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RXRGP48443 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.07■□□□□ 0.96
RXRGP48443 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RXRGP48443 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RXRGP48443 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RXRGP48443 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RXRGP48443 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RXRGP48443 LINC01960-201ENST00000563759 1884 ntBASIC21.07■□□□□ 0.96
RXRGP48443 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RXRGP48443 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.06■□□□□ 0.96
RXRGP48443 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
RXRGP48443 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RXRGP48443 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RXRGP48443 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RXRGP48443 GUSBP6-202ENST00000438529 1198 ntBASIC21.06■□□□□ 0.96
RXRGP48443 AC010141.2-201ENST00000452426 721 ntBASIC21.06■□□□□ 0.96
RXRGP48443 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.06■□□□□ 0.96
RXRGP48443 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.06■□□□□ 0.96
RXRGP48443 LINC00526-201ENST00000581067 1875 ntBASIC21.06■□□□□ 0.96
RXRGP48443 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RXRGP48443 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
RXRGP48443 C1orf229-201ENST00000623686 2258 ntBASIC21.06■□□□□ 0.96
RXRGP48443 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RXRGP48443 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.05■□□□□ 0.96
RXRGP48443 AL121603.2-201ENST00000557373 2117 ntBASIC21.05■□□□□ 0.96
RXRGP48443 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RXRGP48443 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RXRGP48443 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RXRGP48443 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.05■□□□□ 0.96
RXRGP48443 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.05■□□□□ 0.96
RXRGP48443 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.05■□□□□ 0.96
RXRGP48443 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.05■□□□□ 0.96
RXRGP48443 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
RXRGP48443 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RXRGP48443 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RXRGP48443 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RXRGP48443 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RXRGP48443 GUSBP5-202ENST00000510805 1989 ntBASIC21.05■□□□□ 0.96
RXRGP48443 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RXRGP48443 ECEL1P1-201ENST00000373592 1742 ntBASIC21.04■□□□□ 0.96
RXRGP48443 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RXRGP48443 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RXRGP48443 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RXRGP48443 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.04■□□□□ 0.96
RXRGP48443 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RXRGP48443 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.04■□□□□ 0.96
RXRGP48443 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.04■□□□□ 0.96
RXRGP48443 CD99P1-205ENST00000527459 561 ntBASIC21.04■□□□□ 0.96
RXRGP48443 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RXRGP48443 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
RXRGP48443 AP004607.7-201ENST00000527152 1677 ntBASIC21.04■□□□□ 0.96
RXRGP48443 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RXRGP48443 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.04■□□□□ 0.96
RXRGP48443 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RXRGP48443 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RXRGP48443 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RXRGP48443 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RXRGP48443 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.04■□□□□ 0.96
RXRGP48443 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.04■□□□□ 0.96
RXRGP48443 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RXRGP48443 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
RXRGP48443 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RXRGP48443 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RXRGP48443 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RXRGP48443 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RXRGP48443 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RXRGP48443 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RXRGP48443 CNN2P6-201ENST00000439038 900 ntBASIC21.03■□□□□ 0.96
RXRGP48443 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.03■□□□□ 0.96
RXRGP48443 AL034346.1-201ENST00000568244 1277 ntBASIC21.03■□□□□ 0.96
RXRGP48443 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.03■□□□□ 0.96
RXRGP48443 TMEM191A-211ENST00000637163 1067 ntBASIC21.03■□□□□ 0.96
RXRGP48443 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms