Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.03■□□□□ 0.96
CTSKP43235 MIR4651-201ENST00000582622 73 ntBASIC21.03■□□□□ 0.96
CTSKP43235 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.03■□□□□ 0.96
CTSKP43235 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSKP43235 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CTSKP43235 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSKP43235 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSKP43235 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSKP43235 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSKP43235 LINC00526-201ENST00000581067 1875 ntBASIC21.03■□□□□ 0.96
CTSKP43235 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CTSKP43235 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTSKP43235 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CTSKP43235 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.02■□□□□ 0.96
CTSKP43235 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.02■□□□□ 0.96
CTSKP43235 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.02■□□□□ 0.96
CTSKP43235 TERF1P5-201ENST00000477545 1207 ntBASIC21.02■□□□□ 0.96
CTSKP43235 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.02■□□□□ 0.96
CTSKP43235 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.02■□□□□ 0.96
CTSKP43235 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTSKP43235 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CTSKP43235 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
CTSKP43235 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CTSKP43235 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CTSKP43235 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.01■□□□□ 0.95
CTSKP43235 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CTSKP43235 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTSKP43235 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTSKP43235 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.01■□□□□ 0.95
CTSKP43235 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.01■□□□□ 0.95
CTSKP43235 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.01■□□□□ 0.95
CTSKP43235 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CTSKP43235 AC098934.4-201ENST00000564127 592 ntBASIC21.01■□□□□ 0.95
CTSKP43235 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.01■□□□□ 0.95
CTSKP43235 AC066615.1-201ENST00000640911 628 ntBASIC21.01■□□□□ 0.95
CTSKP43235 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTSKP43235 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.01■□□□□ 0.95
CTSKP43235 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CTSKP43235 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.01■□□□□ 0.95
CTSKP43235 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21■□□□□ 0.95
CTSKP43235 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
CTSKP43235 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
CTSKP43235 AC053503.5-201ENST00000601508 636 ntBASIC21■□□□□ 0.95
CTSKP43235 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CTSKP43235 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
CTSKP43235 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21■□□□□ 0.95
CTSKP43235 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21■□□□□ 0.95
CTSKP43235 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21■□□□□ 0.95
CTSKP43235 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21■□□□□ 0.95
CTSKP43235 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CTSKP43235 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTSKP43235 AC233723.2-201ENST00000623798 2106 ntBASIC20.99■□□□□ 0.95
CTSKP43235 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTSKP43235 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTSKP43235 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTSKP43235 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTSKP43235 AC068338.2-201ENST00000563278 1430 ntBASIC20.99■□□□□ 0.95
CTSKP43235 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTSKP43235 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CTSKP43235 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTSKP43235 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.99■□□□□ 0.95
CTSKP43235 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.99■□□□□ 0.95
CTSKP43235 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTSKP43235 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.99■□□□□ 0.95
CTSKP43235 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CTSKP43235 AP006587.3-201ENST00000525742 1516 ntBASIC20.99■□□□□ 0.95
CTSKP43235 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.99■□□□□ 0.95
CTSKP43235 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTSKP43235 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CTSKP43235 CYP2T1P-201ENST00000432607 1285 ntBASIC20.98■□□□□ 0.95
CTSKP43235 AC007322.4-201ENST00000509611 723 ntBASIC20.98■□□□□ 0.95
CTSKP43235 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.98■□□□□ 0.95
CTSKP43235 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTSKP43235 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.98■□□□□ 0.95
CTSKP43235 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.98■□□□□ 0.95
CTSKP43235 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTSKP43235 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.98■□□□□ 0.95
CTSKP43235 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTSKP43235 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTSKP43235 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTSKP43235 LINC00565-201ENST00000562710 2331 ntBASIC20.98■□□□□ 0.95
CTSKP43235 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTSKP43235 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTSKP43235 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
CTSKP43235 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.97■□□□□ 0.95
CTSKP43235 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTSKP43235 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTSKP43235 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTSKP43235 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
CTSKP43235 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.97■□□□□ 0.95
CTSKP43235 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.97■□□□□ 0.95
CTSKP43235 MIR4758-201ENST00000577688 71 ntBASIC20.97■□□□□ 0.95
CTSKP43235 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.97■□□□□ 0.95
CTSKP43235 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.97■□□□□ 0.95
CTSKP43235 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTSKP43235 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.97■□□□□ 0.95
CTSKP43235 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTSKP43235 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTSKP43235 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.97■□□□□ 0.95
CTSKP43235 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms