Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 YGR053CYGR053C 852 nt2.33□□□□□ -2.04
CUP9P41817 YGR219WYGR219W 342 nt2.33□□□□□ -2.04
CUP9P41817 YLR225CYLR225C 1224 nt2.33□□□□□ -2.04
CUP9P41817 HAP4YKL109W 1665 nt2.33□□□□□ -2.04
CUP9P41817 NAB3YPL190C 2409 nt2.33□□□□□ -2.04
CUP9P41817 CTM1YHR109W 1758 nt2.33□□□□□ -2.04
CUP9P41817 YPK3YBR028C 1578 nt2.32□□□□□ -2.04
CUP9P41817 LSM6YDR378C 261 nt2.32□□□□□ -2.04
CUP9P41817 YHR069C-AYHR069C-A 363 nt2.32□□□□□ -2.04
CUP9P41817 GLG2YJL137C 1143 nt2.32□□□□□ -2.04
CUP9P41817 YLR444CYLR444C 303 nt2.32□□□□□ -2.04
CUP9P41817 YPR053CYPR053C 456 nt2.32□□□□□ -2.04
CUP9P41817 ACA1YER045C 1470 nt2.32□□□□□ -2.04
CUP9P41817 ADY4YLR227C 1482 nt2.32□□□□□ -2.04
CUP9P41817 KIN82YCR091W 2163 nt2.32□□□□□ -2.04
CUP9P41817 YKR015CYKR015C 1707 nt2.31□□□□□ -2.04
CUP9P41817 EBS1YDR206W 2655 nt2.31□□□□□ -2.04
CUP9P41817 PDR11YIL013C 4236 nt2.31□□□□□ -2.04
CUP9P41817 HAA1YPR008W 2085 nt2.31□□□□□ -2.04
CUP9P41817 YDR209CYDR209C 414 nt2.31□□□□□ -2.04
CUP9P41817 RTN1YDR233C 888 nt2.31□□□□□ -2.04
CUP9P41817 SMT3YDR510W 306 nt2.31□□□□□ -2.04
CUP9P41817 YIP5YGL161C 933 nt2.31□□□□□ -2.04
CUP9P41817 SPS4YOR313C 1017 nt2.31□□□□□ -2.04
CUP9P41817 RRD2YPL152W 1077 nt2.31□□□□□ -2.04
CUP9P41817 HRD1YOL013C 1656 nt2.31□□□□□ -2.04
CUP9P41817 SPP382YLR424W 2127 nt2.3□□□□□ -2.04
CUP9P41817 IKI3YLR384C 4050 nt2.3□□□□□ -2.04
CUP9P41817 FLO11YIR019C 4104 nt2.3□□□□□ -2.04
CUP9P41817 PCL9YDL179W 915 nt2.3□□□□□ -2.04
CUP9P41817 BSC2YDR275W 708 nt2.3□□□□□ -2.04
CUP9P41817 GRX2YDR513W 432 nt2.3□□□□□ -2.04
CUP9P41817 GPP2YER062C 753 nt2.3□□□□□ -2.04
CUP9P41817 CGR1YGL029W 363 nt2.3□□□□□ -2.04
CUP9P41817 AAH1YNL141W 1044 nt2.3□□□□□ -2.04
CUP9P41817 RSM19YNR037C 276 nt2.3□□□□□ -2.04
CUP9P41817 HNT3YOR258W 654 nt2.3□□□□□ -2.04
CUP9P41817 PST1YDR055W 1335 nt2.3□□□□□ -2.04
CUP9P41817 AEP3YPL005W 1821 nt2.3□□□□□ -2.04
CUP9P41817 MIP6YHR015W 1980 nt2.3□□□□□ -2.04
CUP9P41817 CWH41YGL027C 2502 nt2.3□□□□□ -2.04
CUP9P41817 SAP1YER047C 2694 nt2.3□□□□□ -2.04
CUP9P41817 PDC2YDR081C 2778 nt2.29□□□□□ -2.04
CUP9P41817 SKT5YBL061C 2091 nt2.29□□□□□ -2.04
CUP9P41817 STE24YJR117W 1362 nt2.29□□□□□ -2.04
CUP9P41817 THO1YER063W 657 nt2.29□□□□□ -2.04
CUP9P41817 RPL27AYHR010W 411 nt2.29□□□□□ -2.04
CUP9P41817 YIL089WYIL089W 618 nt2.29□□□□□ -2.04
CUP9P41817 ASG7YJL170C 630 nt2.29□□□□□ -2.04
CUP9P41817 PFK27YOL136C 1194 nt2.29□□□□□ -2.04
CUP9P41817 YOR050CYOR050C 348 nt2.29□□□□□ -2.04
CUP9P41817 SGT1YOR057W 1188 nt2.29□□□□□ -2.04
CUP9P41817 YOR283WYOR283W 693 nt2.29□□□□□ -2.04
CUP9P41817 AFT2YPL202C 1251 nt2.29□□□□□ -2.04
CUP9P41817 PHO88YBR106W 567 nt2.29□□□□□ -2.04
CUP9P41817 VTC3YPL019C 2508 nt2.29□□□□□ -2.04
CUP9P41817 CDC55YGL190C 1581 nt2.28□□□□□ -2.04
CUP9P41817 SMC2YFR031C 3513 nt2.28□□□□□ -2.04
CUP9P41817 GIN4YDR507C 3429 nt2.28□□□□□ -2.04
CUP9P41817 RPL14BYHL001W 417 nt2.28□□□□□ -2.04
CUP9P41817 YKR011CYKR011C 1062 nt2.28□□□□□ -2.04
CUP9P41817 ENV10YLR065C 546 nt2.28□□□□□ -2.04
CUP9P41817 ATP11YNL315C 957 nt2.28□□□□□ -2.04
CUP9P41817 YOR263CYOR263C 408 nt2.28□□□□□ -2.04
CUP9P41817 YPR027CYPR027C 834 nt2.28□□□□□ -2.04
CUP9P41817 PFF1YBR074W 2931 nt2.28□□□□□ -2.04
CUP9P41817 TOM70YNL121C 1854 nt2.28□□□□□ -2.04
CUP9P41817 VAC14YLR386W 2643 nt2.27□□□□□ -2.05
CUP9P41817 REG1YDR028C 3045 nt2.27□□□□□ -2.05
CUP9P41817 NUP170YBL079W 4509 nt2.27□□□□□ -2.05
CUP9P41817 MSH2YOL090W 2895 nt2.27□□□□□ -2.05
CUP9P41817 YDR355CYDR355C 303 nt2.27□□□□□ -2.05
CUP9P41817 PEA2YER149C 1263 nt2.27□□□□□ -2.05
CUP9P41817 RPL24BYGR148C 468 nt2.27□□□□□ -2.05
CUP9P41817 VMA5YKL080W 1179 nt2.27□□□□□ -2.05
CUP9P41817 CAF20YOR276W 486 nt2.27□□□□□ -2.05
CUP9P41817 PBI1YPL272C 1554 nt2.27□□□□□ -2.05
CUP9P41817 OSW7YFR039C 1533 nt2.27□□□□□ -2.05
CUP9P41817 PDR1YGL013C 3207 nt2.27□□□□□ -2.05
CUP9P41817 SOK1YDR006C 2706 nt2.26□□□□□ -2.05
CUP9P41817 SWC4YGR002C 1431 nt2.26□□□□□ -2.05
CUP9P41817 BNR1YIL159W 4128 nt2.26□□□□□ -2.05
CUP9P41817 RSM24YDR175C 960 nt2.26□□□□□ -2.05
CUP9P41817 MMS21YEL019C 804 nt2.26□□□□□ -2.05
CUP9P41817 EMC2YJR088C 879 nt2.26□□□□□ -2.05
CUP9P41817 REX3YLR107W 1215 nt2.26□□□□□ -2.05
CUP9P41817 REC102YLR329W 795 nt2.26□□□□□ -2.05
CUP9P41817 AAR2YBL074C 1068 nt2.26□□□□□ -2.05
CUP9P41817 LCL1YPL056C 306 nt2.26□□□□□ -2.05
CUP9P41817 YBR085C-AYBR085C-A 258 nt2.26□□□□□ -2.05
CUP9P41817 KAR4YCL055W 1008 nt2.26□□□□□ -2.05
CUP9P41817 YDR061WYDR061W 1620 nt2.26□□□□□ -2.05
CUP9P41817 VPS3YDR495C 3036 nt2.26□□□□□ -2.05
CUP9P41817 PTI1YGR156W 1278 nt2.25□□□□□ -2.05
CUP9P41817 PAU14YIL176C 363 nt2.25□□□□□ -2.05
CUP9P41817 PAU1YJL223C 363 nt2.25□□□□□ -2.05
CUP9P41817 YET2YMR040W 483 nt2.25□□□□□ -2.05
CUP9P41817 MRPS17YMR188C 714 nt2.25□□□□□ -2.05
CUP9P41817 YBL094CYBL094C 333 nt2.25□□□□□ -2.05
CUP9P41817 YOL050CYOL050C 321 nt2.25□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 16 ms