Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
KDM5CP41229 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
KDM5CP41229 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC32.03■■■□□ 2.72
KDM5CP41229 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC32.03■■■□□ 2.72
KDM5CP41229 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
KDM5CP41229 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC32.03■■■□□ 2.72
KDM5CP41229 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC32.03■■■□□ 2.72
KDM5CP41229 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
KDM5CP41229 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
KDM5CP41229 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
KDM5CP41229 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC32.03■■■□□ 2.72
KDM5CP41229 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC32.03■■■□□ 2.72
KDM5CP41229 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
KDM5CP41229 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC32.03■■■□□ 2.72
KDM5CP41229 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
KDM5CP41229 GATS-209ENST00000454084 1030 ntTSL 3 BASIC32.02■■■□□ 2.72
KDM5CP41229 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
KDM5CP41229 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
KDM5CP41229 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
KDM5CP41229 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC32.02■■■□□ 2.72
KDM5CP41229 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC32.02■■■□□ 2.72
KDM5CP41229 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC32.01■■■□□ 2.72
KDM5CP41229 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC32.01■■■□□ 2.72
KDM5CP41229 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC32.01■■■□□ 2.72
KDM5CP41229 PBX1-209ENST00000485769 834 ntTSL 2 BASIC32.01■■■□□ 2.71
KDM5CP41229 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC32.01■■■□□ 2.71
KDM5CP41229 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC32.01■■■□□ 2.71
KDM5CP41229 ANOS2P-203ENST00000472227 1816 ntBASIC32■■■□□ 2.71
KDM5CP41229 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC32■■■□□ 2.71
KDM5CP41229 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC32■■■□□ 2.71
KDM5CP41229 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
KDM5CP41229 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC32■■■□□ 2.71
KDM5CP41229 MIR4497-201ENST00000583208 89 ntBASIC32■■■□□ 2.71
KDM5CP41229 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
KDM5CP41229 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
KDM5CP41229 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
KDM5CP41229 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
KDM5CP41229 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
KDM5CP41229 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
KDM5CP41229 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC31.99■■■□□ 2.71
KDM5CP41229 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC31.99■■■□□ 2.71
KDM5CP41229 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
KDM5CP41229 AC073912.3-201ENST00000624414 853 ntBASIC31.99■■■□□ 2.71
KDM5CP41229 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC31.99■■■□□ 2.71
KDM5CP41229 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
KDM5CP41229 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
KDM5CP41229 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
KDM5CP41229 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
KDM5CP41229 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC31.98■■■□□ 2.71
KDM5CP41229 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC31.98■■■□□ 2.71
KDM5CP41229 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
KDM5CP41229 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
KDM5CP41229 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC31.98■■■□□ 2.71
KDM5CP41229 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC31.98■■■□□ 2.71
KDM5CP41229 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC31.98■■■□□ 2.71
KDM5CP41229 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC31.97■■■□□ 2.71
KDM5CP41229 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
KDM5CP41229 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
KDM5CP41229 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC31.97■■■□□ 2.71
KDM5CP41229 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
KDM5CP41229 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
KDM5CP41229 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC31.97■■■□□ 2.71
KDM5CP41229 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC31.96■■■□□ 2.71
KDM5CP41229 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
KDM5CP41229 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
KDM5CP41229 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC31.96■■■□□ 2.71
KDM5CP41229 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC31.96■■■□□ 2.71
KDM5CP41229 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
KDM5CP41229 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC31.96■■■□□ 2.71
KDM5CP41229 HLA-B-256ENST00000639848 1089 ntBASIC31.96■■■□□ 2.71
KDM5CP41229 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC31.96■■■□□ 2.71
KDM5CP41229 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
KDM5CP41229 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC31.95■■■□□ 2.71
KDM5CP41229 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
KDM5CP41229 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC31.95■■■□□ 2.71
KDM5CP41229 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC31.95■■■□□ 2.71
KDM5CP41229 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
KDM5CP41229 THRA-202ENST00000394121 2260 ntTSL 2 BASIC31.94■■■□□ 2.7
KDM5CP41229 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC31.94■■■□□ 2.7
KDM5CP41229 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC31.94■■■□□ 2.7
KDM5CP41229 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC31.94■■■□□ 2.7
KDM5CP41229 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC31.94■■■□□ 2.7
KDM5CP41229 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC31.94■■■□□ 2.7
KDM5CP41229 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
KDM5CP41229 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
KDM5CP41229 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
KDM5CP41229 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
KDM5CP41229 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC31.94■■■□□ 2.7
KDM5CP41229 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
KDM5CP41229 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC31.94■■■□□ 2.7
KDM5CP41229 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC31.94■■■□□ 2.7
KDM5CP41229 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC31.94■■■□□ 2.7
KDM5CP41229 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
KDM5CP41229 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
KDM5CP41229 NME6-213ENST00000451657 871 ntTSL 2 BASIC31.94■■■□□ 2.7
KDM5CP41229 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC31.94■■■□□ 2.7
KDM5CP41229 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
KDM5CP41229 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
KDM5CP41229 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
KDM5CP41229 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms