Protein–RNA interactions for Protein: P40089

LSM5, U6 snRNA-associated Sm-like protein LSm5, yeastyeast

Known RBP Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM5P40089 TPO5YKL174C 1857 nt3.36□□□□□ -1.87
LSM5P40089 SMC3YJL074C 3693 nt3.35□□□□□ -1.87
LSM5P40089 YDR034C-DYDR034C-D 5313 nt3.35□□□□□ -1.87
LSM5P40089 RPL13AYDL082W 600 nt3.35□□□□□ -1.87
LSM5P40089 YDR431WYDR431W 312 nt3.35□□□□□ -1.87
LSM5P40089 MIG3YER028C 1185 nt3.35□□□□□ -1.87
LSM5P40089 YFH7YFR007W 1062 nt3.35□□□□□ -1.87
LSM5P40089 POL32YJR043C 1053 nt3.35□□□□□ -1.87
LSM5P40089 CMC1YKL137W 336 nt3.35□□□□□ -1.87
LSM5P40089 ECM4YKR076W 1113 nt3.35□□□□□ -1.87
LSM5P40089 RPL15AYLR029C 615 nt3.35□□□□□ -1.87
LSM5P40089 YNL109WYNL109W 546 nt3.35□□□□□ -1.87
LSM5P40089 PFY1YOR122C 381 nt3.35□□□□□ -1.87
LSM5P40089 SRL1YOR247W 633 nt3.35□□□□□ -1.87
LSM5P40089 CUP9YPL177C 921 nt3.35□□□□□ -1.87
LSM5P40089 IOC3YFR013W 2364 nt3.35□□□□□ -1.87
LSM5P40089 ATG26YLR189C 3597 nt3.34□□□□□ -1.87
LSM5P40089 PIB1YDR313C 861 nt3.34□□□□□ -1.87
LSM5P40089 COG7YGL005C 840 nt3.34□□□□□ -1.87
LSM5P40089 MIG2YGL209W 1149 nt3.34□□□□□ -1.87
LSM5P40089 SVP26YHR181W 687 nt3.34□□□□□ -1.87
LSM5P40089 YKL065W-AYKL065W-A 222 nt3.34□□□□□ -1.87
LSM5P40089 RAD14YMR201C 1116 nt3.34□□□□□ -1.87
LSM5P40089 YBL055CYBL055C 1257 nt3.34□□□□□ -1.87
LSM5P40089 IMP4YNL075W 873 nt3.34□□□□□ -1.87
LSM5P40089 DCP1YOL149W 696 nt3.34□□□□□ -1.87
LSM5P40089 HUT1YPL244C 1020 nt3.34□□□□□ -1.87
LSM5P40089 ARO4YBR249C 1113 nt3.34□□□□□ -1.87
LSM5P40089 RNT1YMR239C 1416 nt3.34□□□□□ -1.88
LSM5P40089 EMP70YLR083C 2004 nt3.34□□□□□ -1.88
LSM5P40089 YNR063WYNR063W 1824 nt3.33□□□□□ -1.88
LSM5P40089 DIG2YDR480W 972 nt3.33□□□□□ -1.88
LSM5P40089 RTT105YER104W 627 nt3.33□□□□□ -1.88
LSM5P40089 tV(CAC)DtV(CAC)D 73 nt3.33□□□□□ -1.88
LSM5P40089 tV(CAC)HtV(CAC)H 73 nt3.33□□□□□ -1.88
LSM5P40089 YLR365WYLR365W 333 nt3.33□□□□□ -1.88
LSM5P40089 SPP382YLR424W 2127 nt3.33□□□□□ -1.88
LSM5P40089 TPM1YNL079C 600 nt3.33□□□□□ -1.88
LSM5P40089 YOR366WYOR366W 354 nt3.33□□□□□ -1.88
LSM5P40089 LTP1YPR073C 486 nt3.33□□□□□ -1.88
LSM5P40089 AVT5YBL089W 1380 nt3.33□□□□□ -1.88
LSM5P40089 ENA5YDR038C 3276 nt3.33□□□□□ -1.88
LSM5P40089 ENA2YDR039C 3276 nt3.33□□□□□ -1.88
LSM5P40089 ENA1YDR040C 3276 nt3.33□□□□□ -1.88
LSM5P40089 FKH2YNL068C 2589 nt3.32□□□□□ -1.88
LSM5P40089 YDR090CYDR090C 933 nt3.32□□□□□ -1.88
LSM5P40089 TVP15YDR100W 432 nt3.32□□□□□ -1.88
LSM5P40089 SEC4YFL005W 648 nt3.32□□□□□ -1.88
LSM5P40089 YHL026CYHL026C 948 nt3.32□□□□□ -1.88
LSM5P40089 YLL037WYLL037W 381 nt3.32□□□□□ -1.88
LSM5P40089 MRPL17YNL252C 846 nt3.32□□□□□ -1.88
LSM5P40089 YOL106WYOL106W 354 nt3.32□□□□□ -1.88
LSM5P40089 YPL168WYPL168W 1293 nt3.32□□□□□ -1.88
LSM5P40089 ATG21YPL100W 1491 nt3.32□□□□□ -1.88
LSM5P40089 POL4YCR014C 1749 nt3.32□□□□□ -1.88
LSM5P40089 MDM36YPR083W 1740 nt3.32□□□□□ -1.88
LSM5P40089 FRE8YLR047C 2061 nt3.32□□□□□ -1.88
LSM5P40089 ARO1YDR127W 4767 nt3.31□□□□□ -1.88
LSM5P40089 RAD2YGR258C 3096 nt3.31□□□□□ -1.88
LSM5P40089 YAT2YER024W 2772 nt3.31□□□□□ -1.88
LSM5P40089 SOK1YDR006C 2706 nt3.31□□□□□ -1.88
LSM5P40089 RIX1YHR197W 2292 nt3.31□□□□□ -1.88
LSM5P40089 EAP1YKL204W 1899 nt3.31□□□□□ -1.88
LSM5P40089 PIG2YIL045W 1617 nt3.31□□□□□ -1.88
LSM5P40089 COM2YER130C 1332 nt3.31□□□□□ -1.88
LSM5P40089 YNL011CYNL011C 1335 nt3.31□□□□□ -1.88
LSM5P40089 RUB1YDR139C 234 nt3.31□□□□□ -1.88
LSM5P40089 GUK1YDR454C 564 nt3.31□□□□□ -1.88
LSM5P40089 SPT4YGR063C 309 nt3.31□□□□□ -1.88
LSM5P40089 FSH1YHR049W 732 nt3.31□□□□□ -1.88
LSM5P40089 RFA3YJL173C 369 nt3.31□□□□□ -1.88
LSM5P40089 OST6YML019W 999 nt3.31□□□□□ -1.88
LSM5P40089 RUF5-1RUF5-1 710 nt3.31□□□□□ -1.88
LSM5P40089 RUF5-2RUF5-2 710 nt3.31□□□□□ -1.88
LSM5P40089 INO4YOL108C 456 nt3.31□□□□□ -1.88
LSM5P40089 TIF4631YGR162W 2859 nt3.31□□□□□ -1.88
LSM5P40089 YLR352WYLR352W 2424 nt3.31□□□□□ -1.88
LSM5P40089 AKR1YDR264C 2295 nt3.3□□□□□ -1.88
LSM5P40089 SRB7YDR308C 423 nt3.3□□□□□ -1.88
LSM5P40089 RPS8BYER102W 603 nt3.3□□□□□ -1.88
LSM5P40089 EFG1YGR271C-A 702 nt3.3□□□□□ -1.88
LSM5P40089 YJR037WYJR037W 384 nt3.3□□□□□ -1.88
LSM5P40089 SOD1YJR104C 465 nt3.3□□□□□ -1.88
LSM5P40089 SSN8YNL025C 972 nt3.3□□□□□ -1.88
LSM5P40089 RPS8AYBL072C 603 nt3.3□□□□□ -1.88
LSM5P40089 YOR097CYOR097C 528 nt3.3□□□□□ -1.88
LSM5P40089 ATP22YDR350C 2055 nt3.3□□□□□ -1.88
LSM5P40089 MSR1YHR091C 1932 nt3.3□□□□□ -1.88
LSM5P40089 TOM70YNL121C 1854 nt3.3□□□□□ -1.88
LSM5P40089 CWH41YGL027C 2502 nt3.29□□□□□ -1.88
LSM5P40089 MAM1YER106W 909 nt3.29□□□□□ -1.88
LSM5P40089 VFA1YER128W 612 nt3.29□□□□□ -1.88
LSM5P40089 THP2YHR167W 786 nt3.29□□□□□ -1.88
LSM5P40089 YJL175WYJL175W 513 nt3.29□□□□□ -1.88
LSM5P40089 YAL064WYAL064W 285 nt3.29□□□□□ -1.88
LSM5P40089 ENV10YLR065C 546 nt3.29□□□□□ -1.88
LSM5P40089 YLR076CYLR076C 423 nt3.29□□□□□ -1.88
LSM5P40089 YLR154C-HYLR154C-H 132 nt3.29□□□□□ -1.88
LSM5P40089 YLR156C-AYLR156C-A 132 nt3.29□□□□□ -1.88
LSM5P40089 YLR157C-CYLR157C-C 132 nt3.29□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 18 ms