Protein–RNA interactions for Protein: P36954

POLR2I, DNA-directed RNA polymerase II subunit RPB9, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2IP36954 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2IP36954 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2IP36954 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2IP36954 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2IP36954 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2IP36954 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2IP36954 AP005212.1-201ENST00000581547 1997 ntBASIC19.44■□□□□ 0.7
POLR2IP36954 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2IP36954 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
POLR2IP36954 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
POLR2IP36954 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
POLR2IP36954 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2IP36954 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.44■□□□□ 0.7
POLR2IP36954 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2IP36954 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
POLR2IP36954 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2IP36954 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
POLR2IP36954 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.44■□□□□ 0.7
POLR2IP36954 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.44■□□□□ 0.7
POLR2IP36954 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.44■□□□□ 0.7
POLR2IP36954 AL031848.2-201ENST00000607670 837 ntBASIC19.44■□□□□ 0.7
POLR2IP36954 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2IP36954 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
POLR2IP36954 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2IP36954 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2IP36954 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2IP36954 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.44■□□□□ 0.7
POLR2IP36954 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2IP36954 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2IP36954 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2IP36954 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2IP36954 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.44■□□□□ 0.7
POLR2IP36954 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2IP36954 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2IP36954 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2IP36954 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2IP36954 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.43■□□□□ 0.7
POLR2IP36954 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.43■□□□□ 0.7
POLR2IP36954 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.43■□□□□ 0.7
POLR2IP36954 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
POLR2IP36954 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2IP36954 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2IP36954 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2IP36954 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2IP36954 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.42■□□□□ 0.7
POLR2IP36954 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.42■□□□□ 0.7
POLR2IP36954 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2IP36954 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2IP36954 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2IP36954 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2IP36954 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.42■□□□□ 0.7
POLR2IP36954 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.42■□□□□ 0.7
POLR2IP36954 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.42■□□□□ 0.7
POLR2IP36954 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2IP36954 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2IP36954 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.42■□□□□ 0.7
POLR2IP36954 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2IP36954 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
POLR2IP36954 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2IP36954 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.42■□□□□ 0.7
POLR2IP36954 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2IP36954 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
POLR2IP36954 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2IP36954 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
POLR2IP36954 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
POLR2IP36954 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2IP36954 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2IP36954 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2IP36954 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.41■□□□□ 0.7
POLR2IP36954 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2IP36954 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2IP36954 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2IP36954 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2IP36954 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
POLR2IP36954 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2IP36954 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2IP36954 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2IP36954 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2IP36954 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2IP36954 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.41■□□□□ 0.7
POLR2IP36954 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.41■□□□□ 0.7
POLR2IP36954 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
POLR2IP36954 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2IP36954 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2IP36954 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2IP36954 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2IP36954 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2IP36954 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.41■□□□□ 0.7
POLR2IP36954 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2IP36954 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2IP36954 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2IP36954 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.4■□□□□ 0.7
POLR2IP36954 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2IP36954 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
POLR2IP36954 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.4■□□□□ 0.7
POLR2IP36954 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2IP36954 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.4■□□□□ 0.7
POLR2IP36954 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
POLR2IP36954 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.4■□□□□ 0.7
POLR2IP36954 AL451085.2-201ENST00000605085 799 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms