Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCK1P35558 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
PCK1P35558 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCK1P35558 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCK1P35558 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
PCK1P35558 AC012414.1-201ENST00000556676 535 ntBASIC22.2■■□□□ 1.14
PCK1P35558 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.2■■□□□ 1.14
PCK1P35558 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCK1P35558 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.2■■□□□ 1.14
PCK1P35558 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
PCK1P35558 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.2■■□□□ 1.14
PCK1P35558 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCK1P35558 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCK1P35558 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.2■■□□□ 1.14
PCK1P35558 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCK1P35558 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCK1P35558 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
PCK1P35558 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.19■■□□□ 1.14
PCK1P35558 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.19■■□□□ 1.14
PCK1P35558 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.19■■□□□ 1.14
PCK1P35558 AC055733.4-201ENST00000638462 1354 ntBASIC22.19■■□□□ 1.14
PCK1P35558 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCK1P35558 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.19■■□□□ 1.14
PCK1P35558 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCK1P35558 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.19■■□□□ 1.14
PCK1P35558 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCK1P35558 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCK1P35558 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCK1P35558 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.18■■□□□ 1.14
PCK1P35558 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.18■■□□□ 1.14
PCK1P35558 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.18■■□□□ 1.14
PCK1P35558 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.18■■□□□ 1.14
PCK1P35558 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCK1P35558 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCK1P35558 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCK1P35558 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCK1P35558 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCK1P35558 AC005224.4-201ENST00000583262 1652 ntBASIC22.17■■□□□ 1.14
PCK1P35558 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.17■■□□□ 1.14
PCK1P35558 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCK1P35558 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCK1P35558 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.17■■□□□ 1.14
PCK1P35558 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.17■■□□□ 1.14
PCK1P35558 MIR638-201ENST00000385237 100 ntBASIC22.17■■□□□ 1.14
PCK1P35558 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCK1P35558 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.17■■□□□ 1.14
PCK1P35558 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCK1P35558 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCK1P35558 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCK1P35558 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCK1P35558 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
PCK1P35558 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCK1P35558 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCK1P35558 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCK1P35558 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCK1P35558 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.16■■□□□ 1.14
PCK1P35558 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.16■■□□□ 1.14
PCK1P35558 AL354811.1-201ENST00000610286 706 ntBASIC22.16■■□□□ 1.14
PCK1P35558 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCK1P35558 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.16■■□□□ 1.14
PCK1P35558 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCK1P35558 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.16■■□□□ 1.14
PCK1P35558 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCK1P35558 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.16■■□□□ 1.14
PCK1P35558 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCK1P35558 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCK1P35558 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCK1P35558 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
PCK1P35558 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.15■■□□□ 1.14
PCK1P35558 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.15■■□□□ 1.14
PCK1P35558 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCK1P35558 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCK1P35558 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.15■■□□□ 1.14
PCK1P35558 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCK1P35558 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.15■■□□□ 1.14
PCK1P35558 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCK1P35558 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
PCK1P35558 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
PCK1P35558 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC22.15■■□□□ 1.14
PCK1P35558 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.15■■□□□ 1.14
PCK1P35558 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCK1P35558 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCK1P35558 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
PCK1P35558 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.14
PCK1P35558 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
PCK1P35558 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCK1P35558 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCK1P35558 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.14■■□□□ 1.13
PCK1P35558 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCK1P35558 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.14■■□□□ 1.13
PCK1P35558 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.14■■□□□ 1.13
PCK1P35558 AL358852.1-201ENST00000623174 1268 ntBASIC22.14■■□□□ 1.13
PCK1P35558 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCK1P35558 AL137060.1-201ENST00000618151 2648 ntBASIC22.14■■□□□ 1.13
PCK1P35558 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCK1P35558 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCK1P35558 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.14■■□□□ 1.13
PCK1P35558 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
PCK1P35558 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
PCK1P35558 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms