Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
HOXA6P31267 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
HOXA6P31267 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HOXA6P31267 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HOXA6P31267 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HOXA6P31267 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
HOXA6P31267 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HOXA6P31267 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.12■□□□□ 0.97
HOXA6P31267 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HOXA6P31267 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HOXA6P31267 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.12■□□□□ 0.97
HOXA6P31267 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.12■□□□□ 0.97
HOXA6P31267 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.12■□□□□ 0.97
HOXA6P31267 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.12■□□□□ 0.97
HOXA6P31267 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.12■□□□□ 0.97
HOXA6P31267 FAM21FP-204ENST00000608637 956 ntBASIC21.12■□□□□ 0.97
HOXA6P31267 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HOXA6P31267 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.12■□□□□ 0.97
HOXA6P31267 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HOXA6P31267 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HOXA6P31267 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HOXA6P31267 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HOXA6P31267 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
HOXA6P31267 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HOXA6P31267 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HOXA6P31267 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HOXA6P31267 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.11■□□□□ 0.97
HOXA6P31267 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HOXA6P31267 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.11■□□□□ 0.97
HOXA6P31267 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
HOXA6P31267 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HOXA6P31267 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
HOXA6P31267 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HOXA6P31267 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.1■□□□□ 0.97
HOXA6P31267 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
HOXA6P31267 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
HOXA6P31267 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HOXA6P31267 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
HOXA6P31267 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HOXA6P31267 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.1■□□□□ 0.97
HOXA6P31267 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
HOXA6P31267 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HOXA6P31267 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HOXA6P31267 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HOXA6P31267 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
HOXA6P31267 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HOXA6P31267 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.09■□□□□ 0.97
HOXA6P31267 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.09■□□□□ 0.97
HOXA6P31267 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.09■□□□□ 0.97
HOXA6P31267 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
HOXA6P31267 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HOXA6P31267 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.09■□□□□ 0.97
HOXA6P31267 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.08■□□□□ 0.97
HOXA6P31267 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.08■□□□□ 0.97
HOXA6P31267 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.08■□□□□ 0.97
HOXA6P31267 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HOXA6P31267 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
HOXA6P31267 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HOXA6P31267 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.08■□□□□ 0.97
HOXA6P31267 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.08■□□□□ 0.97
HOXA6P31267 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
HOXA6P31267 MIR4497-201ENST00000583208 89 ntBASIC21.08■□□□□ 0.97
HOXA6P31267 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
HOXA6P31267 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.07■□□□□ 0.96
HOXA6P31267 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HOXA6P31267 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.07■□□□□ 0.96
HOXA6P31267 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HOXA6P31267 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
HOXA6P31267 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.07■□□□□ 0.96
HOXA6P31267 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.07■□□□□ 0.96
HOXA6P31267 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
HOXA6P31267 CYP2T3P-201ENST00000601990 817 ntBASIC21.07■□□□□ 0.96
HOXA6P31267 KRT17P1-201ENST00000399211 1546 ntBASIC21.07■□□□□ 0.96
HOXA6P31267 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.07■□□□□ 0.96
HOXA6P31267 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
HOXA6P31267 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HOXA6P31267 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
HOXA6P31267 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOXA6P31267 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
HOXA6P31267 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
HOXA6P31267 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
HOXA6P31267 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.06■□□□□ 0.96
HOXA6P31267 RPPH1-201ENST00000516869 333 ntBASIC21.06■□□□□ 0.96
HOXA6P31267 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.06■□□□□ 0.96
HOXA6P31267 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.06■□□□□ 0.96
HOXA6P31267 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HOXA6P31267 AC073912.3-201ENST00000624414 853 ntBASIC21.06■□□□□ 0.96
HOXA6P31267 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOXA6P31267 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOXA6P31267 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOXA6P31267 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOXA6P31267 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.05■□□□□ 0.96
HOXA6P31267 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HOXA6P31267 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.05■□□□□ 0.96
HOXA6P31267 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXA6P31267 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.05■□□□□ 0.96
HOXA6P31267 AC061975.6-201ENST00000579045 1553 ntBASIC21.05■□□□□ 0.96
HOXA6P31267 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HOXA6P31267 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXA6P31267 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms