Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC28.23■■■□□ 2.11
RXRBP28702 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
RXRBP28702 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
RXRBP28702 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RXRBP28702 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
RXRBP28702 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC28.23■■■□□ 2.11
RXRBP28702 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC28.23■■■□□ 2.11
RXRBP28702 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RXRBP28702 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RXRBP28702 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RXRBP28702 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
RXRBP28702 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
RXRBP28702 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RXRBP28702 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RXRBP28702 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC28.22■■■□□ 2.11
RXRBP28702 USF2-205ENST00000594064 1179 ntTSL 2 BASIC28.22■■■□□ 2.11
RXRBP28702 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RXRBP28702 AC124016.1-201ENST00000609552 612 ntBASIC28.22■■■□□ 2.11
RXRBP28702 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
RXRBP28702 AC079630.1-202ENST00000618127 1840 ntBASIC28.22■■■□□ 2.11
RXRBP28702 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RXRBP28702 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
RXRBP28702 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
RXRBP28702 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC28.21■■■□□ 2.11
RXRBP28702 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
RXRBP28702 MMP23A-201ENST00000234610 1017 ntBASIC28.21■■■□□ 2.11
RXRBP28702 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
RXRBP28702 AC133681.1-201ENST00000465482 601 ntBASIC28.21■■■□□ 2.11
RXRBP28702 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC28.21■■■□□ 2.11
RXRBP28702 PENK-204ENST00000518770 863 ntTSL 2 BASIC28.21■■■□□ 2.11
RXRBP28702 LY6E-205ENST00000519611 635 ntTSL 3 BASIC28.21■■■□□ 2.11
RXRBP28702 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC28.21■■■□□ 2.11
RXRBP28702 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC28.21■■■□□ 2.11
RXRBP28702 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC28.21■■■□□ 2.11
RXRBP28702 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
RXRBP28702 P4HB-223ENST00000576390 439 ntTSL 4 BASIC28.21■■■□□ 2.11
RXRBP28702 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC28.21■■■□□ 2.11
RXRBP28702 AC243732.1-201ENST00000612648 864 ntBASIC28.21■■■□□ 2.11
RXRBP28702 AC005363.2-201ENST00000618631 242 ntBASIC28.21■■■□□ 2.11
RXRBP28702 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC28.21■■■□□ 2.11
RXRBP28702 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC28.21■■■□□ 2.11
RXRBP28702 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
RXRBP28702 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
RXRBP28702 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
RXRBP28702 AP004607.7-201ENST00000527152 1677 ntBASIC28.21■■■□□ 2.11
RXRBP28702 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC28.21■■■□□ 2.11
RXRBP28702 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC28.21■■■□□ 2.11
RXRBP28702 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
RXRBP28702 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
RXRBP28702 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
RXRBP28702 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
RXRBP28702 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC28.2■■■□□ 2.1
RXRBP28702 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC28.2■■■□□ 2.1
RXRBP28702 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC28.2■■■□□ 2.1
RXRBP28702 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
RXRBP28702 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
RXRBP28702 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
RXRBP28702 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
RXRBP28702 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
RXRBP28702 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
RXRBP28702 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RXRBP28702 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
RXRBP28702 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC28.19■■■□□ 2.1
RXRBP28702 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC28.19■■■□□ 2.1
RXRBP28702 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
RXRBP28702 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
RXRBP28702 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC28.18■■■□□ 2.1
RXRBP28702 AC005521.1-201ENST00000393351 872 ntBASIC28.18■■■□□ 2.1
RXRBP28702 SERF2-207ENST00000409614 582 ntTSL 2 BASIC28.18■■■□□ 2.1
RXRBP28702 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
RXRBP28702 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
RXRBP28702 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC28.18■■■□□ 2.1
RXRBP28702 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC28.18■■■□□ 2.1
RXRBP28702 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
RXRBP28702 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC28.18■■■□□ 2.1
RXRBP28702 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
RXRBP28702 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC28.18■■■□□ 2.1
RXRBP28702 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC28.17■■■□□ 2.1
RXRBP28702 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC28.17■■■□□ 2.1
RXRBP28702 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RXRBP28702 MFF-205ENST00000354503 1085 ntTSL 2 BASIC28.17■■■□□ 2.1
RXRBP28702 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RXRBP28702 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC28.17■■■□□ 2.1
RXRBP28702 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RXRBP28702 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC28.17■■■□□ 2.1
RXRBP28702 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC28.17■■■□□ 2.1
RXRBP28702 AL121894.2-201ENST00000602977 491 ntBASIC28.17■■■□□ 2.1
RXRBP28702 MTDHP1-201ENST00000605323 784 ntBASIC28.17■■■□□ 2.1
RXRBP28702 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RXRBP28702 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
RXRBP28702 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
RXRBP28702 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RXRBP28702 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RXRBP28702 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RXRBP28702 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RXRBP28702 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC28.16■■■□□ 2.1
RXRBP28702 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
RXRBP28702 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC28.16■■■□□ 2.1
RXRBP28702 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC28.16■■■□□ 2.1
RXRBP28702 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC28.16■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms