Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ACKR3P25106 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACKR3P25106 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.34■□□□□ 0.53
ACKR3P25106 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACKR3P25106 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACKR3P25106 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACKR3P25106 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACKR3P25106 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACKR3P25106 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACKR3P25106 FEM1AP4-201ENST00000443167 1987 ntBASIC18.33■□□□□ 0.53
ACKR3P25106 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
ACKR3P25106 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ACKR3P25106 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ACKR3P25106 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ACKR3P25106 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ACKR3P25106 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.33■□□□□ 0.52
ACKR3P25106 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ACKR3P25106 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.33■□□□□ 0.52
ACKR3P25106 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ACKR3P25106 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ACKR3P25106 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
ACKR3P25106 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ACKR3P25106 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.33■□□□□ 0.52
ACKR3P25106 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.32■□□□□ 0.52
ACKR3P25106 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.32■□□□□ 0.52
ACKR3P25106 RASA4CP-201ENST00000424092 1398 ntBASIC18.32■□□□□ 0.52
ACKR3P25106 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ACKR3P25106 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.32■□□□□ 0.52
ACKR3P25106 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACKR3P25106 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACKR3P25106 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.32■□□□□ 0.52
ACKR3P25106 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACKR3P25106 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ACKR3P25106 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.32■□□□□ 0.52
ACKR3P25106 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
ACKR3P25106 AL136967.2-201ENST00000623968 743 ntBASIC18.32■□□□□ 0.52
ACKR3P25106 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACKR3P25106 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACKR3P25106 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ACKR3P25106 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACKR3P25106 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.32■□□□□ 0.52
ACKR3P25106 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ACKR3P25106 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACKR3P25106 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACKR3P25106 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.32■□□□□ 0.52
ACKR3P25106 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ACKR3P25106 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.32■□□□□ 0.52
ACKR3P25106 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.32■□□□□ 0.52
ACKR3P25106 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.32■□□□□ 0.52
ACKR3P25106 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ACKR3P25106 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ACKR3P25106 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ACKR3P25106 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ACKR3P25106 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ACKR3P25106 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ACKR3P25106 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ACKR3P25106 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ACKR3P25106 AC091305.1-201ENST00000479476 895 ntBASIC18.31■□□□□ 0.52
ACKR3P25106 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.31■□□□□ 0.52
ACKR3P25106 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.31■□□□□ 0.52
ACKR3P25106 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ACKR3P25106 AC105233.4-201ENST00000642045 216 ntBASIC18.31■□□□□ 0.52
ACKR3P25106 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ACKR3P25106 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
ACKR3P25106 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.31■□□□□ 0.52
ACKR3P25106 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ACKR3P25106 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ACKR3P25106 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ACKR3P25106 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.3■□□□□ 0.52
ACKR3P25106 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ACKR3P25106 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ACKR3P25106 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ACKR3P25106 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ACKR3P25106 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.3■□□□□ 0.52
ACKR3P25106 AL139246.5-201ENST00000606645 996 ntBASIC18.3■□□□□ 0.52
ACKR3P25106 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ACKR3P25106 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ACKR3P25106 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ACKR3P25106 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ACKR3P25106 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ACKR3P25106 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.29■□□□□ 0.52
ACKR3P25106 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ACKR3P25106 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ACKR3P25106 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.29■□□□□ 0.52
ACKR3P25106 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ACKR3P25106 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.29■□□□□ 0.52
ACKR3P25106 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ACKR3P25106 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.29■□□□□ 0.52
ACKR3P25106 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ACKR3P25106 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.29■□□□□ 0.52
ACKR3P25106 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.29■□□□□ 0.52
ACKR3P25106 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.29■□□□□ 0.52
ACKR3P25106 SUDS3P1-201ENST00000505831 966 ntBASIC18.29■□□□□ 0.52
ACKR3P25106 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.29■□□□□ 0.52
ACKR3P25106 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.29■□□□□ 0.52
ACKR3P25106 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ACKR3P25106 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ACKR3P25106 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ACKR3P25106 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ACKR3P25106 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms