Protein–RNA interactions for Protein: P23968

VMA16, V-type proton ATPase subunit c'', yeastyeast

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA16P23968 MGR2YPL098C 342 nt3.35□□□□□ -1.87
VMA16P23968 IRC3YDR332W 2070 nt3.35□□□□□ -1.87
VMA16P23968 ARG2YJL071W 1725 nt3.35□□□□□ -1.87
VMA16P23968 MDM36YPR083W 1740 nt3.35□□□□□ -1.87
VMA16P23968 ARG5,6YER069W 2592 nt3.35□□□□□ -1.87
VMA16P23968 MTR4YJL050W 3222 nt3.34□□□□□ -1.87
VMA16P23968 RSM28YDR494W 1086 nt3.34□□□□□ -1.87
VMA16P23968 YGR226CYGR226C 210 nt3.34□□□□□ -1.87
VMA16P23968 YIL165CYIL165C 360 nt3.34□□□□□ -1.87
VMA16P23968 TVP18YMR071C 504 nt3.34□□□□□ -1.87
VMA16P23968 ASC1YMR116C 960 nt3.34□□□□□ -1.87
VMA16P23968 INO4YOL108C 456 nt3.34□□□□□ -1.87
VMA16P23968 HHF1YBR009C 312 nt3.34□□□□□ -1.87
VMA16P23968 ALA1YOR335C 2877 nt3.34□□□□□ -1.87
VMA16P23968 TPO5YKL174C 1857 nt3.34□□□□□ -1.87
VMA16P23968 YCR075W-AYCR075W-A 228 nt3.33□□□□□ -1.88
VMA16P23968 SMT3YDR510W 306 nt3.33□□□□□ -1.88
VMA16P23968 YER039C-AYER039C-A 219 nt3.33□□□□□ -1.88
VMA16P23968 ECO1YFR027W 846 nt3.33□□□□□ -1.88
VMA16P23968 YIP5YGL161C 933 nt3.33□□□□□ -1.88
VMA16P23968 MND1YGL183C 660 nt3.33□□□□□ -1.88
VMA16P23968 YKL069WYKL069W 543 nt3.33□□□□□ -1.88
VMA16P23968 YKL156C-AYKL156C-A 117 nt3.33□□□□□ -1.88
VMA16P23968 PIR1YKL164C 1026 nt3.33□□□□□ -1.88
VMA16P23968 YLR416CYLR416C 399 nt3.33□□□□□ -1.88
VMA16P23968 YOL114CYOL114C 609 nt3.33□□□□□ -1.88
VMA16P23968 LTP1YPR073C 486 nt3.33□□□□□ -1.88
VMA16P23968 YPR147CYPR147C 915 nt3.33□□□□□ -1.88
VMA16P23968 CMD1YBR109C 444 nt3.33□□□□□ -1.88
VMA16P23968 ADF1YCL058W-A 342 nt3.33□□□□□ -1.88
VMA16P23968 CCM1YGR150C 2595 nt3.33□□□□□ -1.88
VMA16P23968 DIG2YDR480W 972 nt3.32□□□□□ -1.88
VMA16P23968 YGR073CYGR073C 372 nt3.32□□□□□ -1.88
VMA16P23968 QCR10YHR001W-A 234 nt3.32□□□□□ -1.88
VMA16P23968 YJR037WYJR037W 384 nt3.32□□□□□ -1.88
VMA16P23968 VMA5YKL080W 1179 nt3.32□□□□□ -1.88
VMA16P23968 SDS22YKL193C 1017 nt3.32□□□□□ -1.88
VMA16P23968 GIM5YML094W 492 nt3.32□□□□□ -1.88
VMA16P23968 snR35snR35 204 nt3.32□□□□□ -1.88
VMA16P23968 GCN5YGR252W 1320 nt3.32□□□□□ -1.88
VMA16P23968 CDC40YDR364C 1368 nt3.32□□□□□ -1.88
VMA16P23968 HRD1YOL013C 1656 nt3.32□□□□□ -1.88
VMA16P23968 PHO81YGR233C 3537 nt3.32□□□□□ -1.88
VMA16P23968 FAS1YKL182W 6156 nt3.32□□□□□ -1.88
VMA16P23968 ECM16YMR128W 3804 nt3.31□□□□□ -1.88
VMA16P23968 SQS1YNL224C 2304 nt3.31□□□□□ -1.88
VMA16P23968 SRP68YPL243W 1800 nt3.31□□□□□ -1.88
VMA16P23968 VPS17YOR132W 1656 nt3.31□□□□□ -1.88
VMA16P23968 KEI1YDR367W 666 nt3.31□□□□□ -1.88
VMA16P23968 THO1YER063W 657 nt3.31□□□□□ -1.88
VMA16P23968 YFL012W-AYFL012W-A 375 nt3.31□□□□□ -1.88
VMA16P23968 YGL039WYGL039W 1047 nt3.31□□□□□ -1.88
VMA16P23968 YGR039WYGR039W 312 nt3.31□□□□□ -1.88
VMA16P23968 PRP38YGR075C 729 nt3.31□□□□□ -1.88
VMA16P23968 YIL171W-AYIL171W-A 453 nt3.31□□□□□ -1.88
VMA16P23968 LSM1YJL124C 519 nt3.31□□□□□ -1.88
VMA16P23968 YJL220WYJL220W 453 nt3.31□□□□□ -1.88
VMA16P23968 RAD14YMR201C 1116 nt3.31□□□□□ -1.88
VMA16P23968 IZH2YOL002C 954 nt3.31□□□□□ -1.88
VMA16P23968 GCY1YOR120W 939 nt3.31□□□□□ -1.88
VMA16P23968 YPL119C-AYPL119C-A 264 nt3.31□□□□□ -1.88
VMA16P23968 GDT1YBR187W 843 nt3.31□□□□□ -1.88
VMA16P23968 FUS2YMR232W 2034 nt3.31□□□□□ -1.88
VMA16P23968 POL4YCR014C 1749 nt3.3□□□□□ -1.88
VMA16P23968 YNL011CYNL011C 1335 nt3.3□□□□□ -1.88
VMA16P23968 SPR6YER115C 576 nt3.3□□□□□ -1.88
VMA16P23968 SMX2YFL017W-A 234 nt3.3□□□□□ -1.88
VMA16P23968 SNO3YFL060C 669 nt3.3□□□□□ -1.88
VMA16P23968 YIL171WYIL171W 330 nt3.3□□□□□ -1.88
VMA16P23968 ATG38YLR211C 681 nt3.3□□□□□ -1.88
VMA16P23968 SNO2YNL334C 669 nt3.3□□□□□ -1.88
VMA16P23968 SGT1YOR057W 1188 nt3.3□□□□□ -1.88
VMA16P23968 TDA1YMR291W 1761 nt3.3□□□□□ -1.88
VMA16P23968 YAK1YJL141C 2424 nt3.3□□□□□ -1.88
VMA16P23968 PWP2YCR057C 2772 nt3.29□□□□□ -1.88
VMA16P23968 LAS1YKR063C 1509 nt3.29□□□□□ -1.88
VMA16P23968 PFK26YIL107C 2484 nt3.29□□□□□ -1.88
VMA16P23968 SLF1YDR515W 1344 nt3.29□□□□□ -1.88
VMA16P23968 YFL002W-BYFL002W-B 1317 nt3.29□□□□□ -1.88
VMA16P23968 YGR161W-AYGR161W-A 1317 nt3.29□□□□□ -1.88
VMA16P23968 YBL100W-AYBL100W-A 1317 nt3.29□□□□□ -1.88
VMA16P23968 YCL020WYCL020W 1317 nt3.29□□□□□ -1.88
VMA16P23968 ATP25YMR098C 1839 nt3.29□□□□□ -1.88
VMA16P23968 RPN2YIL075C 2838 nt3.29□□□□□ -1.88
VMA16P23968 YDR509WYDR509W 348 nt3.29□□□□□ -1.88
VMA16P23968 YER046W-AYER046W-A 330 nt3.29□□□□□ -1.88
VMA16P23968 MST27YGL051W 705 nt3.29□□□□□ -1.88
VMA16P23968 YIP1YGR172C 747 nt3.29□□□□□ -1.88
VMA16P23968 tQ(UUG)CtQ(UUG)C 72 nt3.29□□□□□ -1.88
VMA16P23968 tQ(UUG)D1tQ(UUG)D1 72 nt3.29□□□□□ -1.88
VMA16P23968 tQ(UUG)D2tQ(UUG)D2 72 nt3.29□□□□□ -1.88
VMA16P23968 tQ(UUG)D3tQ(UUG)D3 72 nt3.29□□□□□ -1.88
VMA16P23968 tQ(UUG)E1tQ(UUG)E1 72 nt3.29□□□□□ -1.88
VMA16P23968 tQ(UUG)HtQ(UUG)H 72 nt3.29□□□□□ -1.88
VMA16P23968 tQ(UUG)LtQ(UUG)L 72 nt3.29□□□□□ -1.88
VMA16P23968 YHR212CYHR212C 336 nt3.29□□□□□ -1.88
VMA16P23968 DAL2YIR029W 1032 nt3.29□□□□□ -1.88
VMA16P23968 MST28YAR033W 705 nt3.29□□□□□ -1.88
VMA16P23968 YKE2YLR200W 345 nt3.29□□□□□ -1.88
VMA16P23968 YAR060CYAR060C 336 nt3.29□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 17.8 ms