Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
NR4A1P22736 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NR4A1P22736 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NR4A1P22736 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NR4A1P22736 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.5■□□□□ 0.71
NR4A1P22736 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NR4A1P22736 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NR4A1P22736 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NR4A1P22736 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NR4A1P22736 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NR4A1P22736 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
NR4A1P22736 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.5■□□□□ 0.71
NR4A1P22736 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
NR4A1P22736 AC144652.1-201ENST00000609974 1624 ntBASIC19.5■□□□□ 0.71
NR4A1P22736 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NR4A1P22736 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NR4A1P22736 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
NR4A1P22736 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NR4A1P22736 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.49■□□□□ 0.71
NR4A1P22736 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.49■□□□□ 0.71
NR4A1P22736 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
NR4A1P22736 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
NR4A1P22736 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
NR4A1P22736 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
NR4A1P22736 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NR4A1P22736 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NR4A1P22736 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NR4A1P22736 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NR4A1P22736 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NR4A1P22736 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NR4A1P22736 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
NR4A1P22736 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NR4A1P22736 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NR4A1P22736 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NR4A1P22736 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NR4A1P22736 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NR4A1P22736 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
NR4A1P22736 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NR4A1P22736 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
NR4A1P22736 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
NR4A1P22736 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.47■□□□□ 0.71
NR4A1P22736 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.47■□□□□ 0.71
NR4A1P22736 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NR4A1P22736 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
NR4A1P22736 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.47■□□□□ 0.71
NR4A1P22736 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.47■□□□□ 0.71
NR4A1P22736 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.47■□□□□ 0.71
NR4A1P22736 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.47■□□□□ 0.71
NR4A1P22736 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.47■□□□□ 0.71
NR4A1P22736 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NR4A1P22736 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NR4A1P22736 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
NR4A1P22736 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NR4A1P22736 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NR4A1P22736 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
NR4A1P22736 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
NR4A1P22736 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
NR4A1P22736 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NR4A1P22736 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NR4A1P22736 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.47■□□□□ 0.71
NR4A1P22736 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.47■□□□□ 0.71
NR4A1P22736 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.47■□□□□ 0.71
NR4A1P22736 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
NR4A1P22736 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NR4A1P22736 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NR4A1P22736 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NR4A1P22736 C17orf82-201ENST00000623772 1530 ntBASIC19.46■□□□□ 0.71
NR4A1P22736 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.46■□□□□ 0.71
NR4A1P22736 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NR4A1P22736 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NR4A1P22736 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
NR4A1P22736 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
NR4A1P22736 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.46■□□□□ 0.71
NR4A1P22736 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.46■□□□□ 0.71
NR4A1P22736 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NR4A1P22736 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NR4A1P22736 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NR4A1P22736 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NR4A1P22736 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NR4A1P22736 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.46■□□□□ 0.71
NR4A1P22736 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
NR4A1P22736 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NR4A1P22736 AC087289.5-201ENST00000586076 3175 ntBASIC19.46■□□□□ 0.71
NR4A1P22736 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.46■□□□□ 0.71
NR4A1P22736 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NR4A1P22736 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NR4A1P22736 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NR4A1P22736 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
NR4A1P22736 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NR4A1P22736 FEM1AP1-201ENST00000431297 1995 ntBASIC19.45■□□□□ 0.7
NR4A1P22736 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NR4A1P22736 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NR4A1P22736 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.45■□□□□ 0.7
NR4A1P22736 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NR4A1P22736 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NR4A1P22736 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NR4A1P22736 AFG3L1P-217ENST00000557444 2447 ntBASIC19.45■□□□□ 0.7
NR4A1P22736 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NR4A1P22736 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NR4A1P22736 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms