Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.67■□□□□ 0.58
MSR1P21757 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.67■□□□□ 0.58
MSR1P21757 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.67■□□□□ 0.58
MSR1P21757 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MSR1P21757 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.67■□□□□ 0.58
MSR1P21757 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSR1P21757 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSR1P21757 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSR1P21757 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MSR1P21757 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MSR1P21757 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
MSR1P21757 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
MSR1P21757 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
MSR1P21757 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSR1P21757 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.66■□□□□ 0.58
MSR1P21757 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
MSR1P21757 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
MSR1P21757 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.66■□□□□ 0.58
MSR1P21757 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MSR1P21757 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.66■□□□□ 0.58
MSR1P21757 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MSR1P21757 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
MSR1P21757 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MSR1P21757 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.66■□□□□ 0.58
MSR1P21757 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSR1P21757 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSR1P21757 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.66■□□□□ 0.58
MSR1P21757 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.66■□□□□ 0.58
MSR1P21757 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSR1P21757 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSR1P21757 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MSR1P21757 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSR1P21757 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
MSR1P21757 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.66■□□□□ 0.58
MSR1P21757 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSR1P21757 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MSR1P21757 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
MSR1P21757 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MSR1P21757 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MSR1P21757 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
MSR1P21757 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MSR1P21757 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
MSR1P21757 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.65■□□□□ 0.58
MSR1P21757 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MSR1P21757 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MSR1P21757 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.65■□□□□ 0.58
MSR1P21757 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MSR1P21757 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MSR1P21757 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MSR1P21757 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.65■□□□□ 0.58
MSR1P21757 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MSR1P21757 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSR1P21757 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSR1P21757 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSR1P21757 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
MSR1P21757 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MSR1P21757 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.64■□□□□ 0.57
MSR1P21757 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSR1P21757 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.64■□□□□ 0.57
MSR1P21757 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.64■□□□□ 0.57
MSR1P21757 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.64■□□□□ 0.57
MSR1P21757 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.64■□□□□ 0.57
MSR1P21757 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSR1P21757 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
MSR1P21757 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MSR1P21757 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MSR1P21757 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSR1P21757 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSR1P21757 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.64■□□□□ 0.57
MSR1P21757 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MSR1P21757 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MSR1P21757 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MSR1P21757 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MSR1P21757 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MSR1P21757 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.63■□□□□ 0.57
MSR1P21757 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.63■□□□□ 0.57
MSR1P21757 MIR6084-201ENST00000622012 110 ntBASIC18.63■□□□□ 0.57
MSR1P21757 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.63■□□□□ 0.57
MSR1P21757 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MSR1P21757 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MSR1P21757 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
MSR1P21757 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
MSR1P21757 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MSR1P21757 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MSR1P21757 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MSR1P21757 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MSR1P21757 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
MSR1P21757 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.62■□□□□ 0.57
MSR1P21757 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.62■□□□□ 0.57
MSR1P21757 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MSR1P21757 TPRG1LP1-201ENST00000598702 760 ntBASIC18.62■□□□□ 0.57
MSR1P21757 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.62■□□□□ 0.57
MSR1P21757 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.62■□□□□ 0.57
MSR1P21757 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
MSR1P21757 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MSR1P21757 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.62■□□□□ 0.57
MSR1P21757 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.62■□□□□ 0.57
MSR1P21757 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
MSR1P21757 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
MSR1P21757 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms