Protein–RNA interactions for Protein: P19623

SRM, Spermidine synthase, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP19623 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SRMP19623 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SRMP19623 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
SRMP19623 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.43■□□□□ 0.54
SRMP19623 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SRMP19623 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SRMP19623 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SRMP19623 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SRMP19623 GABARAPL3-202ENST00000624044 1851 ntBASIC18.43■□□□□ 0.54
SRMP19623 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SRMP19623 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SRMP19623 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRMP19623 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.42■□□□□ 0.54
SRMP19623 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRMP19623 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRMP19623 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRMP19623 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRMP19623 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.42■□□□□ 0.54
SRMP19623 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRMP19623 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRMP19623 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SRMP19623 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SRMP19623 AL034346.1-201ENST00000568244 1277 ntBASIC18.42■□□□□ 0.54
SRMP19623 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRMP19623 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRMP19623 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRMP19623 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SRMP19623 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRMP19623 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRMP19623 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRMP19623 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.41■□□□□ 0.54
SRMP19623 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SRMP19623 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRMP19623 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.41■□□□□ 0.54
SRMP19623 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.41■□□□□ 0.54
SRMP19623 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.41■□□□□ 0.54
SRMP19623 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.41■□□□□ 0.54
SRMP19623 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.41■□□□□ 0.54
SRMP19623 AC006455.2-201ENST00000429931 906 ntBASIC18.41■□□□□ 0.54
SRMP19623 TSPY9P-201ENST00000440215 945 ntBASIC18.41■□□□□ 0.54
SRMP19623 TSPY11P-201ENST00000442607 1045 ntBASIC18.41■□□□□ 0.54
SRMP19623 AC010141.3-201ENST00000456659 717 ntBASIC18.41■□□□□ 0.54
SRMP19623 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.41■□□□□ 0.54
SRMP19623 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRMP19623 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRMP19623 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRMP19623 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SRMP19623 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SRMP19623 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRMP19623 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SRMP19623 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRMP19623 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
SRMP19623 AC006128.1-201ENST00000624704 1661 ntBASIC18.41■□□□□ 0.54
SRMP19623 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRMP19623 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRMP19623 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRMP19623 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.4■□□□□ 0.54
SRMP19623 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRMP19623 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRMP19623 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRMP19623 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRMP19623 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.4■□□□□ 0.54
SRMP19623 AP005212.1-201ENST00000581547 1997 ntBASIC18.4■□□□□ 0.54
SRMP19623 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SRMP19623 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRMP19623 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRMP19623 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRMP19623 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.4■□□□□ 0.54
SRMP19623 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.39■□□□□ 0.54
SRMP19623 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SRMP19623 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRMP19623 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRMP19623 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.39■□□□□ 0.53
SRMP19623 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.39■□□□□ 0.53
SRMP19623 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
SRMP19623 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRMP19623 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRMP19623 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.39■□□□□ 0.53
SRMP19623 AC239859.2-201ENST00000444165 318 ntBASIC18.39■□□□□ 0.53
SRMP19623 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.39■□□□□ 0.53
SRMP19623 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.39■□□□□ 0.53
SRMP19623 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRMP19623 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.39■□□□□ 0.53
SRMP19623 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRMP19623 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SRMP19623 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.39■□□□□ 0.53
SRMP19623 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRMP19623 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.39■□□□□ 0.53
SRMP19623 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SRMP19623 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SRMP19623 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SRMP19623 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRMP19623 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRMP19623 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.38■□□□□ 0.53
SRMP19623 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SRMP19623 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRMP19623 OR2I1P-207ENST00000453522 948 ntBASIC18.38■□□□□ 0.53
SRMP19623 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRMP19623 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRMP19623 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms