Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KRT4P19013 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT4P19013 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KRT4P19013 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
KRT4P19013 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KRT4P19013 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT4P19013 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KRT4P19013 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT4P19013 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
KRT4P19013 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.18■□□□□ 0.98
KRT4P19013 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KRT4P19013 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT4P19013 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KRT4P19013 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT4P19013 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
KRT4P19013 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.17■□□□□ 0.98
KRT4P19013 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.17■□□□□ 0.98
KRT4P19013 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT4P19013 OR2I1P-207ENST00000453522 948 ntBASIC21.17■□□□□ 0.98
KRT4P19013 AC010141.3-201ENST00000456659 717 ntBASIC21.17■□□□□ 0.98
KRT4P19013 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KRT4P19013 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.17■□□□□ 0.98
KRT4P19013 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT4P19013 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT4P19013 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
KRT4P19013 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
KRT4P19013 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT4P19013 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT4P19013 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT4P19013 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT4P19013 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
KRT4P19013 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.16■□□□□ 0.98
KRT4P19013 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.16■□□□□ 0.98
KRT4P19013 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.16■□□□□ 0.98
KRT4P19013 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.16■□□□□ 0.98
KRT4P19013 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
KRT4P19013 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT4P19013 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT4P19013 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.16■□□□□ 0.98
KRT4P19013 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
KRT4P19013 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT4P19013 MIR3181-201ENST00000578512 73 ntBASIC21.16■□□□□ 0.98
KRT4P19013 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
KRT4P19013 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT4P19013 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT4P19013 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KRT4P19013 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
KRT4P19013 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
KRT4P19013 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT4P19013 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.15■□□□□ 0.98
KRT4P19013 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT4P19013 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
KRT4P19013 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT4P19013 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT4P19013 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.15■□□□□ 0.98
KRT4P19013 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
KRT4P19013 AL034346.1-201ENST00000568244 1277 ntBASIC21.15■□□□□ 0.98
KRT4P19013 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.15■□□□□ 0.98
KRT4P19013 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT4P19013 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.15■□□□□ 0.98
KRT4P19013 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.15■□□□□ 0.98
KRT4P19013 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT4P19013 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT4P19013 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT4P19013 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
KRT4P19013 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
KRT4P19013 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
KRT4P19013 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.14■□□□□ 0.98
KRT4P19013 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
KRT4P19013 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KRT4P19013 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.14■□□□□ 0.97
KRT4P19013 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
KRT4P19013 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
KRT4P19013 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.14■□□□□ 0.97
KRT4P19013 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.14■□□□□ 0.97
KRT4P19013 UNC93B8-201ENST00000511903 705 ntBASIC21.14■□□□□ 0.97
KRT4P19013 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.14■□□□□ 0.97
KRT4P19013 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.14■□□□□ 0.97
KRT4P19013 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.14■□□□□ 0.97
KRT4P19013 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRT4P19013 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRT4P19013 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KRT4P19013 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.13■□□□□ 0.97
KRT4P19013 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.13■□□□□ 0.97
KRT4P19013 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
KRT4P19013 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT4P19013 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT4P19013 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT4P19013 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.13■□□□□ 0.97
KRT4P19013 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.13■□□□□ 0.97
KRT4P19013 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.13■□□□□ 0.97
KRT4P19013 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT4P19013 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.13■□□□□ 0.97
KRT4P19013 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT4P19013 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.13■□□□□ 0.97
KRT4P19013 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT4P19013 AP004607.7-201ENST00000527152 1677 ntBASIC21.12■□□□□ 0.97
KRT4P19013 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT4P19013 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT4P19013 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms