Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
XRCC1P18887 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.04■□□□□ 0.96
XRCC1P18887 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
XRCC1P18887 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.04■□□□□ 0.96
XRCC1P18887 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
XRCC1P18887 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.04■□□□□ 0.96
XRCC1P18887 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.04■□□□□ 0.96
XRCC1P18887 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.04■□□□□ 0.96
XRCC1P18887 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
XRCC1P18887 AC009237.3-201ENST00000393279 1427 ntBASIC21.04■□□□□ 0.96
XRCC1P18887 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
XRCC1P18887 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
XRCC1P18887 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
XRCC1P18887 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
XRCC1P18887 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
XRCC1P18887 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
XRCC1P18887 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
XRCC1P18887 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
XRCC1P18887 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
XRCC1P18887 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.03■□□□□ 0.96
XRCC1P18887 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.03■□□□□ 0.96
XRCC1P18887 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
XRCC1P18887 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.03■□□□□ 0.96
XRCC1P18887 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
XRCC1P18887 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
XRCC1P18887 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
XRCC1P18887 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
XRCC1P18887 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
XRCC1P18887 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.03■□□□□ 0.96
XRCC1P18887 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
XRCC1P18887 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.02■□□□□ 0.96
XRCC1P18887 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
XRCC1P18887 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
XRCC1P18887 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
XRCC1P18887 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.02■□□□□ 0.96
XRCC1P18887 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
XRCC1P18887 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.02■□□□□ 0.96
XRCC1P18887 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
XRCC1P18887 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.02■□□□□ 0.96
XRCC1P18887 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.02■□□□□ 0.96
XRCC1P18887 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.02■□□□□ 0.96
XRCC1P18887 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
XRCC1P18887 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
XRCC1P18887 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.02■□□□□ 0.96
XRCC1P18887 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
XRCC1P18887 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
XRCC1P18887 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
XRCC1P18887 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
XRCC1P18887 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
XRCC1P18887 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.01■□□□□ 0.95
XRCC1P18887 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
XRCC1P18887 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
XRCC1P18887 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
XRCC1P18887 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
XRCC1P18887 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
XRCC1P18887 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
XRCC1P18887 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
XRCC1P18887 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
XRCC1P18887 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
XRCC1P18887 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
XRCC1P18887 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
XRCC1P18887 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.01■□□□□ 0.95
XRCC1P18887 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
XRCC1P18887 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.01■□□□□ 0.95
XRCC1P18887 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21■□□□□ 0.95
XRCC1P18887 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
XRCC1P18887 AC005224.4-201ENST00000583262 1652 ntBASIC21■□□□□ 0.95
XRCC1P18887 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
XRCC1P18887 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
XRCC1P18887 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
XRCC1P18887 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21■□□□□ 0.95
XRCC1P18887 GXYLT1P2-201ENST00000433312 1230 ntBASIC21■□□□□ 0.95
XRCC1P18887 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21■□□□□ 0.95
XRCC1P18887 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21■□□□□ 0.95
XRCC1P18887 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21■□□□□ 0.95
XRCC1P18887 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21■□□□□ 0.95
XRCC1P18887 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
XRCC1P18887 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
XRCC1P18887 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
XRCC1P18887 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
XRCC1P18887 OR7E47P-201ENST00000546390 1422 ntBASIC20.99■□□□□ 0.95
XRCC1P18887 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.99■□□□□ 0.95
XRCC1P18887 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
XRCC1P18887 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
XRCC1P18887 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
XRCC1P18887 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
XRCC1P18887 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
XRCC1P18887 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
XRCC1P18887 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
XRCC1P18887 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
XRCC1P18887 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
XRCC1P18887 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
XRCC1P18887 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.98■□□□□ 0.95
XRCC1P18887 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.98■□□□□ 0.95
XRCC1P18887 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.98■□□□□ 0.95
XRCC1P18887 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.98■□□□□ 0.95
XRCC1P18887 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.98■□□□□ 0.95
XRCC1P18887 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
XRCC1P18887 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
XRCC1P18887 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms