Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
VCLP18206 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
VCLP18206 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VCLP18206 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VCLP18206 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.18■□□□□ 0.98
VCLP18206 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VCLP18206 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VCLP18206 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.18■□□□□ 0.98
VCLP18206 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VCLP18206 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
VCLP18206 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
VCLP18206 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
VCLP18206 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
VCLP18206 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
VCLP18206 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VCLP18206 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
VCLP18206 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
VCLP18206 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.17■□□□□ 0.98
VCLP18206 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VCLP18206 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.17■□□□□ 0.98
VCLP18206 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.17■□□□□ 0.98
VCLP18206 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.17■□□□□ 0.98
VCLP18206 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.17■□□□□ 0.98
VCLP18206 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.17■□□□□ 0.98
VCLP18206 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VCLP18206 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
VCLP18206 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
VCLP18206 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.16■□□□□ 0.98
VCLP18206 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
VCLP18206 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VCLP18206 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VCLP18206 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.16■□□□□ 0.98
VCLP18206 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.16■□□□□ 0.98
VCLP18206 CCDC92B-201ENST00000575506 885 ntBASIC21.16■□□□□ 0.98
VCLP18206 TPRG1LP1-201ENST00000598702 760 ntBASIC21.16■□□□□ 0.98
VCLP18206 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VCLP18206 AC026310.3-201ENST00000625186 2373 ntBASIC21.16■□□□□ 0.98
VCLP18206 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.15■□□□□ 0.98
VCLP18206 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VCLP18206 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VCLP18206 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
VCLP18206 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
VCLP18206 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.15■□□□□ 0.98
VCLP18206 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VCLP18206 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
VCLP18206 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
VCLP18206 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
VCLP18206 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VCLP18206 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VCLP18206 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
VCLP18206 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
VCLP18206 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VCLP18206 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.15■□□□□ 0.98
VCLP18206 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.15■□□□□ 0.98
VCLP18206 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.15■□□□□ 0.98
VCLP18206 TERF1P2-201ENST00000583350 1212 ntBASIC21.15■□□□□ 0.98
VCLP18206 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VCLP18206 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.15■□□□□ 0.98
VCLP18206 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.15■□□□□ 0.98
VCLP18206 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
VCLP18206 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.15■□□□□ 0.98
VCLP18206 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
VCLP18206 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.15■□□□□ 0.98
VCLP18206 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VCLP18206 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.15■□□□□ 0.98
VCLP18206 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.15■□□□□ 0.98
VCLP18206 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
VCLP18206 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.15■□□□□ 0.98
VCLP18206 AP004607.7-201ENST00000527152 1677 ntBASIC21.15■□□□□ 0.98
VCLP18206 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
VCLP18206 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
VCLP18206 AC092667.1-201ENST00000434301 2586 ntBASIC21.14■□□□□ 0.98
VCLP18206 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
VCLP18206 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VCLP18206 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VCLP18206 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VCLP18206 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VCLP18206 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
VCLP18206 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
VCLP18206 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.14■□□□□ 0.97
VCLP18206 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.14■□□□□ 0.97
VCLP18206 KRT18P14-201ENST00000534205 1250 ntBASIC21.14■□□□□ 0.97
VCLP18206 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VCLP18206 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
VCLP18206 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.14■□□□□ 0.97
VCLP18206 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
VCLP18206 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.13■□□□□ 0.97
VCLP18206 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VCLP18206 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
VCLP18206 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
VCLP18206 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VCLP18206 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VCLP18206 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
VCLP18206 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VCLP18206 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VCLP18206 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VCLP18206 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VCLP18206 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.13■□□□□ 0.97
VCLP18206 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.13■□□□□ 0.97
VCLP18206 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms