Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.7■□□□□ 0.9
HOXB3P14651 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.7■□□□□ 0.9
HOXB3P14651 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
HOXB3P14651 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.7■□□□□ 0.9
HOXB3P14651 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HOXB3P14651 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.7■□□□□ 0.9
HOXB3P14651 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXB3P14651 AP004607.7-201ENST00000527152 1677 ntBASIC20.7■□□□□ 0.9
HOXB3P14651 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
HOXB3P14651 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
HOXB3P14651 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXB3P14651 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
HOXB3P14651 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXB3P14651 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXB3P14651 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXB3P14651 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXB3P14651 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXB3P14651 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXB3P14651 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXB3P14651 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXB3P14651 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXB3P14651 OR7E47P-201ENST00000546390 1422 ntBASIC20.69■□□□□ 0.9
HOXB3P14651 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXB3P14651 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXB3P14651 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
HOXB3P14651 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.68■□□□□ 0.9
HOXB3P14651 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXB3P14651 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXB3P14651 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
HOXB3P14651 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.68■□□□□ 0.9
HOXB3P14651 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXB3P14651 AL158047.1-201ENST00000445918 881 ntBASIC20.68■□□□□ 0.9
HOXB3P14651 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXB3P14651 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
HOXB3P14651 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.68■□□□□ 0.9
HOXB3P14651 MFSD11-216ENST00000590393 1141 ntBASIC20.68■□□□□ 0.9
HOXB3P14651 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXB3P14651 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXB3P14651 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.68■□□□□ 0.9
HOXB3P14651 EP400NL-214ENST00000641289 2402 ntBASIC20.67■□□□□ 0.9
HOXB3P14651 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
HOXB3P14651 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXB3P14651 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXB3P14651 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.67■□□□□ 0.9
HOXB3P14651 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXB3P14651 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXB3P14651 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXB3P14651 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXB3P14651 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXB3P14651 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
HOXB3P14651 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.67■□□□□ 0.9
HOXB3P14651 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.67■□□□□ 0.9
HOXB3P14651 KRT18P21-201ENST00000515767 1272 ntBASIC20.67■□□□□ 0.9
HOXB3P14651 RNA5SP413-201ENST00000516373 109 ntBASIC20.67■□□□□ 0.9
HOXB3P14651 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.67■□□□□ 0.9
HOXB3P14651 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXB3P14651 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.67■□□□□ 0.9
HOXB3P14651 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXB3P14651 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.67■□□□□ 0.9
HOXB3P14651 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HOXB3P14651 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.67■□□□□ 0.9
HOXB3P14651 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXB3P14651 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXB3P14651 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.66■□□□□ 0.9
HOXB3P14651 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.66■□□□□ 0.9
HOXB3P14651 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXB3P14651 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXB3P14651 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXB3P14651 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXB3P14651 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXB3P14651 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXB3P14651 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
HOXB3P14651 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXB3P14651 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXB3P14651 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXB3P14651 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXB3P14651 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXB3P14651 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.65■□□□□ 0.9
HOXB3P14651 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXB3P14651 SLC29A4P1-201ENST00000398760 971 ntBASIC20.65■□□□□ 0.9
HOXB3P14651 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.65■□□□□ 0.9
HOXB3P14651 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXB3P14651 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXB3P14651 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXB3P14651 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.65■□□□□ 0.9
HOXB3P14651 AP001160.3-201ENST00000601484 763 ntBASIC20.65■□□□□ 0.9
HOXB3P14651 AC133041.1-202ENST00000642053 222 ntBASIC20.65■□□□□ 0.9
HOXB3P14651 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXB3P14651 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXB3P14651 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HOXB3P14651 AC242852.2-201ENST00000615738 1807 ntBASIC20.64■□□□□ 0.9
HOXB3P14651 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HOXB3P14651 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HOXB3P14651 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HOXB3P14651 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HOXB3P14651 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXB3P14651 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
HOXB3P14651 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXB3P14651 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.64■□□□□ 0.89
HOXB3P14651 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms